title: ViTraM: visualization of transcriptional modules.
abstract: BACKGROUND
  We developed ViTraM, a tool that allows visualizing overlapping transcriptional modules in an intuitive way. By visualizing not only the genes and the experiments in which the genes are co-expressed, but also additional properties of the modules such as the regulators and regulatory motifs that are responsible for the observed co-expression, ViTraM can assist in the biological analysis and interpretation of the output of module detection tools.
  
  
  BACKGROUND
  The ViTraM software is platform-independent. The software and supplementary material are available at: http://homes.esat.kuleuven.be/~kmarchal/ViTraM/Index.html
authors: Department of Electrical Engineering, Katholieke Universiteit Leuven, Heverlee, Belgium.
authors: Hong
authors: H
authors: Sun
authors: Karen
authors: K
authors: Lemmens
authors: Tim
authors: T
authors: Van den Bulcke
authors: Kristof
authors: K
authors: Engelen
authors: Bart
authors: B
authors: De Moor
authors: Kathleen
authors: K
authors: Marchal
mesh_terms: D019295:Computational Biology / Q000379:methods*; D030541:Databases, Genetic; D020869:Gene Expression Profiling / Q000379:methods; D017422:Sequence Analysis, DNA; D012984:Software; D014158:Transcription, Genetic; D014584:User-Computer Interface