SNP-o-matic.
BACKGROUND
High throughput sequencing technologies generate large amounts of short reads. Mapping these to a reference sequence consumes large amounts of processing time and memory, and read mapping errors can lead to noisy or incorrect alignments. SNP-o-matic is a fast, memory-efficient and stringent read mapping tool offering a variety of analytical output functions, with an emphasis on genotyping.


BACKGROUND
http://snpomatic.sourceforge.net.
Manske
Heinrich Magnus
HM
Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK. mm6@sanger.ac.uk
Kwiatkowski
Dominic P
DP
D000465:Algorithms; D019295:Computational Biology / Q000379:methods*; D020407:Internet; D020641:Polymorphism, Single Nucleotide; D012984:Software