title: Quantification of DNA and protein adsorption by optical phase shift.
abstract: A primary advantage of label-free detection methods over fluorescent measurements is its quantitative detection capability, since an absolute measure of adsorbed material facilitates kinetic characterization of biomolecular interactions. Interferometric techniques relate the optical phase to biomolecular layer density on the surface, but the conversion factor has not previously been accurately determined. We present a calibration method for phase shift measurements and apply it to surface-bound bovine serum albumin, immunoglobulin G, and single-stranded DNA. Biomolecules with known concentrations dissolved in salt-free water were spotted with precise volumes on the array surface and upon evaporation of the water, left a readily calculated mass. Using our label-free technique, the calculated mass of the biolayer was compared with the measured thickness, and we observed a linear dependence over 4 orders of magnitude. We determined that the widely accepted conversion of 1 nm of thickness corresponds to approximately 1 ng/mm(2) surface density held reasonably well for these substances and through our experiments can now be further specified for different types of biomolecules. Through accurate calibration of the dependence of thickness on surface density, we have established a relation allowing precise determination of the absolute number of molecules for single-stranded DNA and two different proteins.
authors.affiliation: Department of Electrical & Computer Engineering, Boston University, 8 St. Mary's Street, Boston, MA 02215, USA.
authors.forename: Emre
authors.initials: E
authors.lastname: Ozkumur
authors.forename: Ayça
authors.initials: A
authors.lastname: Yalçin
authors.forename: Marina
authors.initials: M
authors.lastname: Cretich
authors.forename: Carlos A
authors.initials: CA
authors.lastname: Lopez
authors.forename: David A
authors.initials: DA
authors.lastname: Bergstein
authors.forename: Bennett B
authors.initials: BB
authors.lastname: Goldberg
authors.forename: Marcella
authors.initials: M
authors.lastname: Chiari
authors.forename: M Selim
authors.initials: MS
authors.lastname: Unlü
mesh_terms: D000327:Adsorption; D000818:Animals; D015374:Biosensing Techniques / Q000295:instrumentation / Q000379:methods*; D002138:Calibration; D002417:Cattle; D004277:DNA, Single-Stranded / Q000032:analysis*; D004867:Equipment Design; D007074:Immunoglobulin G / Q000032:analysis*; D055095:Optics and Photonics; D011817:Rabbits; D012710:Serum Albumin, Bovine / Q000032:analysis*
chemical_list: D004277:DNA, Single-Stranded; D007074:Immunoglobulin G; D012710:Serum Albumin, Bovine