title: Structure and mechanism of a Na+-independent amino acid transporter.
abstract: Amino acid, polyamine, and organocation (APC) transporters are secondary transporters that play essential roles in nutrient uptake, neurotransmitter recycling, ionic homeostasis, and regulation of cell volume. Here, we present the crystal structure of apo-ApcT, a proton-coupled broad-specificity amino acid transporter, at 2.35 angstrom resolution. The structure contains 12 transmembrane helices, with the first 10 consisting of an inverted structural repeat of 5 transmembrane helices like the leucine transporter LeuT. The ApcT structure reveals an inward-facing, apo state and an amine moiety of lysine-158 located in a position equivalent to the sodium ion site Na2 of LeuT. We propose that lysine-158 is central to proton-coupled transport and that the amine group serves the same functional role as the Na2 ion in LeuT, thus demonstrating common principles among proton- and sodium-coupled transporters.
authors.affiliation: Vollum Institute, Oregon Health and Science University, 3181 Southwest Sam Jackson Park Road, Portland, OR 97239, USA.
authors.forename: Paul L
authors.initials: PL
authors.lastname: Shaffer
authors.forename: April
authors.initials: A
authors.lastname: Goehring
authors.forename: Aruna
authors.initials: A
authors.lastname: Shankaranarayanan
authors.forename: Eric
authors.initials: E
authors.lastname: Gouaux
mesh_terms: D000595:Amino Acid Sequence; D026905:Amino Acid Transport Systems / Q000737:chemistry* / Q000378:metabolism*; D000596:Amino Acids / Q000378:metabolism; D017920:Antiporters / Q000737:chemistry; D001059:Apoproteins / Q000737:chemistry / Q000378:metabolism; D019843:Archaeal Proteins / Q000737:chemistry* / Q000378:metabolism*; D003460:Crystallization; D018360:Crystallography, X-Ray; D029968:Escherichia coli Proteins / Q000737:chemistry; D017017:Methanococcus / Q000737:chemistry*; D008958:Models, Molecular; D008969:Molecular Sequence Data; D011487:Protein Conformation; D017510:Protein Folding; D017433:Protein Structure, Secondary; D011522:Protons; D012964:Sodium / Q000378:metabolism; D013379:Substrate Specificity
chemical_list: C476528:AdiC protein, E coli; D026905:Amino Acid Transport Systems; D000596:Amino Acids; D017920:Antiporters; D001059:Apoproteins; D019843:Archaeal Proteins; D029968:Escherichia coli Proteins; D011522:Protons; D012964:Sodium