title: ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data.
abstract: ShortRead is a package for input, quality assessment, manipulation and output of high-throughput sequencing data. ShortRead is provided in the R and Bioconductor environments, allowing ready access to additional facilities for advanced statistical analysis, data transformation, visualization and integration with diverse genomic resources.
  
  
  METHODS
  This package is implemented in R and available at the Bioconductor web site; the package contains a 'vignette' outlining typical work flows.
authors: Program in Computational Biology, Fred Hutchinson Cancer Research Center, Seattle, WA, USA. mtmorgan@fhcrc.org
authors: Martin
authors: M
authors: Morgan
authors: Simon
authors: S
authors: Anders
authors: Michael
authors: M
authors: Lawrence
authors: Patrick
authors: P
authors: Aboyoun
authors: Hervé
authors: H
authors: Pagès
authors: Robert
authors: R
authors: Gentleman
mesh_terms: D019295:Computational Biology / Q000379:methods*; D030541:Databases, Genetic; D020869:Gene Expression Profiling; D017422:Sequence Analysis, DNA / Q000379:methods*; D012984:Software