Dietzia timorensis sp. nov., isolated from soil.
An actinomycete strain, ID05-A0528(T), was isolated using the SDS-yeast extract pre-treatment method from soil under mahogany (Swietenia mahogani) trees in West Timor, Indonesia, and was examined by using a polyphasic taxonomic approach. Chemotaxonomic and phylogenetic characterizations demonstrated that the novel strain belongs to the genus Dietzia. 16S rRNA gene sequencing studies showed that the strain was related to Dietzia cinnamea (97.2 %). Results of phenotypic and phylogenetic analyses determined that strain ID05-A0528(T) is different from the known species of the genus Dietzia. It is proposed that the isolate should be classified as a representative of a novel species of the genus Dietzia, with the name Dietzia timorensis sp. nov. The type strain is ID05-A0528(T) (=BTCC B-560(T) =NBRC 104184(T)).
Yamamura
Hideki
H
NITE Biological Resource Center, Department of Biotechnology, National Institute of Technology and Evaluation, Japan.|Division of Applied Biological Sciences, Interdisciplinary Graduate School of Medicine and Engineering, University of Yamanashi, Takeda-4, Kofu 400, Japan.
Lisdiyanti
Puspita
P
Research Center for Biotechnology, Indonesian Institute of Sciences, Jl. Raya Bogor Km. 46, Cibinong 16911, Indonesia.
Ridwan
Roni
R
Research Center for Biotechnology, Indonesian Institute of Sciences, Jl. Raya Bogor Km. 46, Cibinong 16911, Indonesia.
Ratnakomala
Shanti
S
Research Center for Biotechnology, Indonesian Institute of Sciences, Jl. Raya Bogor Km. 46, Cibinong 16911, Indonesia.
Sarawati
Rasti
R
Soil Reseach Institute, Jl. Ir. H. Juanda 98, Bogor 16002, Indonesia.
Lestari
Yulin
Y
Department of Biology, Faculty of Mathematics and Natural Sciences, Bogor Agricultural University, Jalan Raya Pajajaran, Bogor 16144, Indonesia.
Triana
Evi
E
Research Center for Biology, Indonesian Institute of Sciences, Jl. Raya Bogor Km. 46, Cibinong 16911, Indonesia.
Kartina
Gina
G
Research Center for Biotechnology, Indonesian Institute of Sciences, Jl. Raya Bogor Km. 46, Cibinong 16911, Indonesia.
Widyastuti
Yantyati
Y
Research Center for Biotechnology, Indonesian Institute of Sciences, Jl. Raya Bogor Km. 46, Cibinong 16911, Indonesia.
Ando
Katsuhiko
K
NITE Biological Resource Center, Department of Biotechnology, National Institute of Technology and Evaluation, Japan.
D000192:Actinomycetales / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification; D001483:Base Sequence; D007214:Indonesia; D008969:Molecular Sequence Data; D010802:Phylogeny; D012329:RNA, Bacterial / Q000235:genetics; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D012689:Sequence Homology, Nucleic Acid; D012988:Soil Microbiology
D012329:RNA, Bacterial; D012336:RNA, Ribosomal, 16S