Isolation and sequence analysis of a small cryptic plasmid pRK10 from a corrosion inhibitor degrading strain Serratia marcescens ACE2.
The nucleotide sequence of a smallest cryptic plasmid pRK10 of Serratia marcescens ACE2 was determined. When compared to the all other plasmids reported so far from S. marcescens in sizes of over 70kb, pRK10 is only 4241bp long with 53% G+C content and has five coding sequences representing a coding percentage of 65.41. This small plasmid consists of one Tdh gene, four mobilization genes, mobCABD, and an origin of replication homologous to those of ColE1-type plasmids. Analysis of the five open reading frames identified on the plasmid suggests the presence of genes involved in replication and mobilization containing sequences homologous to the bom region and mobCABD genes of ColE1 and Tdh from Acinetobacter baumannii str. AYE. Results also indicate that pRK10 does not encode any gene for antibiotic/heavy metal resistance. Copy number and incompatibility of the plasmid with plasmids of ColE1 origin of replication was determined and it is quite stable in its natural host as well as in Escherichia coli DH5alpha. This relatively small plasmid will be useful for construction of shuttle vectors to facilitate the genetic analysis.
Syed Ibrahim
Kalibulla
K
Department of Biotechnology, Alagappa University, Tamil Nadu, India.
Bakkiyaraj
Dhamodharan
D
James
Roswin
R
Ganesh Babu
Thambidurai
T
Karutha Pandian
Shunmugiah Thevar
ST
D040981:Acinetobacter baumannii / Q000235:genetics; D001426:Bacterial Proteins / Q000235:genetics*; D001483:Base Sequence; D003343:Corrosion; D008969:Molecular Sequence Data; D010957:Plasmids / Q000235:genetics*; D017422:Sequence Analysis, DNA; D012706:Serratia marcescens / Q000235:genetics*
D001426:Bacterial Proteins; C083180:Mob protein, Bacteria