title: Nucleotide sequence and genomic organization of a newly identified member of the genus Carmovirus, soybean yellow mottle mosaic virus, from soybean.
abstract: The viral genome of soybean yellow mottle mosaic virus (SYMMV) from infected soybean (Glycine max) in Korea was cloned and sequenced. The complete monopartite single-stranded RNA genome of SYMMV consists of 4009 base pairs with six putative open reading frames and includes 5'- and 3'-untranslated regions of 39 and 229 nucleotides, respectively. The nucleotide and coat protein sequences of SYMMV share the highest sequence identity with those of cowpea mottle virus. Based on its genomic organization, its predicted amino acid sequence, and its phylogenetic relatedness to known carmoviruses, we report that SYMMV is a new member of the genus Carmovirus in the family Tombusviridae.
authors.affiliation: Agricultural Microbiology Division, National Academy of Agricultural Science, RDA, Suwon, Korea.
authors.forename: Moon
authors.initials: M
authors.lastname: Nam
authors.forename: Sang Mok
authors.initials: SM
authors.lastname: Kim
authors.forename: Leslie L
authors.initials: LL
authors.lastname: Domier
authors.forename: Serry
authors.initials: S
authors.lastname: Koh
authors.forename: Jung Kyung
authors.initials: JK
authors.lastname: Moon
authors.forename: Hong Soo
authors.initials: HS
authors.lastname: Choi
authors.forename: Hong Gi
authors.initials: HG
authors.lastname: Kim
authors.forename: Jae Sun
authors.initials: JS
authors.lastname: Moon
authors.forename: Su-Heon
authors.initials: SH
authors.lastname: Lee
mesh_terms: D020413:3' Untranslated Regions / Q000235:genetics; D020121:5' Untranslated Regions / Q000235:genetics; D001483:Base Sequence; D019184:Carmovirus / Q000235:genetics*; D016679:Genome, Viral / Q000235:genetics; D008969:Molecular Sequence Data; D009029:Mosaic Viruses / Q000235:genetics; D010802:Phylogeny; D013025:Glycine max / Q000821:virology*
chemical_list: D020413:3' Untranslated Regions; D020121:5' Untranslated Regions