Molecular characterization, expression pattern, and function analysis of the OsBC1L family in rice.
COBRA-like proteins play important roles in cell expansion and cell wall biosynthesis in Arabidopsis. In rice, a COBRA-like gene, BRITTLE CULM1 (BC1), has been identified as a regulator controlling the culm mechanical strength. Analysis of the rice genome indicated that BC1 belongs to an 11-member multigene family, termed the OsBC1L family in this study. Based on sequence comparisons and phylogenetic analysis, the OsBC1L family comprises two main subgroups. Expression patterns examined by microarray and reverse transcription polymerase chain reaction revealed that OsBC1L genes exhibit universal or specific expression patterns. Through T-DNA or Tos17 insertion mutant lines, the functions of six OsBC1L family members have been examined by investigating the phenotype variations of knockout mutants under normal growth conditions. Results suggest that the OsBC1L genes perform a range of functions and participate in various developmental processes in rice.
Dai
Xiaoxia
X
National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, 430070 Wuhan, China.
You
Changjun
C
Wang
Lei
L
Chen
Guoxing
G
Zhang
Qifa
Q
Wu
Changyin
C
D000595:Amino Acid Sequence; D032461:Chromosomes, Plant / Q000235:genetics; D004269:DNA, Bacterial / Q000235:genetics / Q000502:physiology; D020869:Gene Expression Profiling; D018506:Gene Expression Regulation, Plant / Q000235:genetics / Q000502:physiology*; D018625:Microscopy, Atomic Force; D008969:Molecular Sequence Data; D020411:Oligonucleotide Array Sequence Analysis; D012275:Oryza / Q000235:genetics / Q000378:metabolism* / Q000502:physiology* / Q000648:ultrastructure; D010802:Phylogeny; D010940:Plant Proteins / Q000737:chemistry / Q000145:classification / Q000235:genetics / Q000502:physiology*; D011058:Pollen / Q000235:genetics / Q000502:physiology / Q000648:ultrastructure; D020133:Reverse Transcriptase Polymerase Chain Reaction; D017386:Sequence Homology, Amino Acid
D004269:DNA, Bacterial; D010940:Plant Proteins; C036483:T-DNA
Planta. 2006 Oct;224(5):1174-84
16752131
Plant Physiol. 2003 Sep;133(1):73-83
12970476
Science. 2000 Nov 10;290(5494):1151-5
11073452
Plant J. 2000 Jun;22(6):561-70
10886776
Plant J. 2007 Jun;50(5):873-85
17470057
Plant Physiol. 2007 Jan;143(1):172-87
17098858
Plant J. 2003 Aug;35(3):418-27
12887592
J Struct Funct Genomics. 2003;3(1-4):117-29
12836691
Protein Eng. 1998 Dec;11(12):1155-61
9930665
Plant Cell Physiol. 2006 Nov;47(11):1457-72
16990291
Development. 1993 Sep;119(1):57-70
8275864
New Phytol. 2005 Mar;165(3):937-46
15720704
Plant J. 2008 Jun;54(5):888-98
18298667
Science. 2002 Apr 5;296(5565):92-100
11935018
Plant Physiol. 2007 Dec;145(4):1444-59
17932309
Int J Plant Sci. 1993;154(1):10-21
11537965
J Mol Biol. 2004 Jul 16;340(4):783-95
15223320
Curr Opin Cell Biol. 1995 Jun;7(3):406-13
7662372
Biochem Soc Trans. 1994 May;22(2):374-8
7958328
Proc Natl Acad Sci U S A. 2005 Jun 14;102(24):8633-8
15932943
Plant Cell. 2005 Aug;17(8):2281-95
15980264
J Mol Biol. 1982 May 5;157(1):105-32
7108955
Brief Bioinform. 2004 Jun;5(2):150-63
15260895
Mol Plant. 2008 Sep;1(5):715-9
19825575
Plant J. 2007 Mar;49(5):947-59
17253985
Plant Cell. 2005 Jun;17(6):1749-63
15849274
Annu Rev Cell Dev Biol. 2005;21:271-95
16212496
Plant Mol Biol. 2004 Feb;54(3):325-34
15284490
Plant Physiol. 2002 Dec;130(4):1636-44
12481047
Gene. 2008 Apr 15;412(1-2):59-70
18291602
Bioinformatics. 2002 Dec;18(12):1585-92
12490442
Plant Cell. 2000 Mar;12(3):405-18
10715326
Plant Cell. 2003 Sep;15(9):2020-31
12953108
Genes Dev. 2001 May 1;15(9):1115-27
11331607
Plant J. 2006 Jan;45(1):83-100
16367956
Mol Genet Genomics. 2008 Nov;280(5):437-52
18810495
Mol Genet Genomics. 2008 Aug;280(2):139-51
18491141
Science. 2002 Apr 5;296(5565):79-92
11935017
Proc Natl Acad Sci U S A. 1998 Mar 3;95(5):2021-6
9482828
Proc Natl Acad Sci U S A. 2002 Oct 15;99(21):13627-32
12374856
Development. 1995 Apr;121(4):1237-52
7743935
Plant Physiol. 2002 Oct;130(2):538-48
12376623
Plant Cell. 2000 Oct;12(10):1961-74
11041890
Curr Opin Cell Biol. 1990 Oct;2(5):920-8
2083091
Nucleic Acids Res. 1997 Dec 15;25(24):4876-82
9396791