title: Metadynamics simulations of calcite crystallization on self-assembled monolayers.
abstract: We show that recent developments in the application of metadynamics methods to direct simulations of crystallization make it possible to predict the orientation of crystals grown on self-assembled monolayers. In contrast to previous studies, the method allows for dynamic treatment of the organic component and the inclusion of explicit surface water without the need for computationally intensive interfacial energy calculations or prior knowledge of the interfacial structure. The method is applied to calcite crystallization on carboxylate terminated alkanethiols arrayed on Au (111). We demonstrate that a dynamic treatment of the monolayer is sufficient to reproduce the experimental results without the need to impose epitaxial constraints on the system. We also observe an odd-even effect in the variation of selectivity with organic chain length, reproducing experimentally observed orientations in both cases. Analysis of the ordering process in our simulations suggests a cycle of mutual control in which both the organic and mineral components induce complementary local order across the interface, leading to the formation of a critical crystalline region. The influence of pH, together with some factors that might affect the range of applicability of our method, is discussed.
authors.affiliation: Department of Chemistry and Centre for Scientific Computing, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom. d.quigley@warwick.ac.uk
authors.forename: D
authors.initials: D
authors.lastname: Quigley
authors.forename: P M
authors.initials: PM
authors.lastname: Rodger
authors.forename: C L
authors.initials: CL
authors.lastname: Freeman
authors.forename: J H
authors.initials: JH
authors.lastname: Harding
authors.forename: D M
authors.initials: DM
authors.lastname: Duffy
mesh_terms: D002119:Calcium Carbonate / Q000737:chemistry*; D003198:Computer Simulation; D003460:Crystallization; D006863:Hydrogen-Ion Concentration; D015233:Models, Statistical; D008968:Molecular Conformation; D015394:Molecular Structure; D053758:Nanoparticles / Q000737:chemistry; D036103:Nanotechnology / Q000379:methods; D010316:Particle Size; D012997:Solvents / Q000737:chemistry; D013499:Surface Properties; D013997:Time Factors
chemical_list: D012997:Solvents; D002119:Calcium Carbonate