title: Sampling-rate-dependent probabilistic Boolean networks.
abstract: External control of a genetic regulatory network is used for the purpose of avoiding undesirable states, such as those associated with a disease. To date, intervention has mainly focused on the external control of probabilistic Boolean networks via the associated discrete-time discrete-space Markov processes. Implementation of an intervention policy derived for probabilistic Boolean networks requires nearly continuous observation of the underlying biological system since precise application requires the observation of all transitions. In medical applications, as in many engineering problems, the process is sampled at discrete time intervals and a decision to intervene or not must be made at each sample point. In this work, sampling-rate-dependent probabilistic Boolean network is proposed as an extension of probabilistic Boolean network. The proposed framework is capable of capturing the sampling rate of the underlying system.
authors.affiliation: Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX 77843, USA. golnaz@tamu.edu
authors.forename: Golnaz
authors.initials: G
authors.lastname: Vahedi
authors.forename: Babak
authors.initials: B
authors.lastname: Faryabi
authors.forename: Jean-Francois
authors.initials: JF
authors.lastname: Chamberland
authors.forename: Aniruddha
authors.initials: A
authors.lastname: Datta
authors.forename: Edward R
authors.initials: ER
authors.lastname: Dougherty
mesh_terms: D053263:Gene Regulatory Networks; D006801:Humans; D008390:Markov Chains; D015233:Models, Statistical; D011336:Probability; D013997:Time Factors