title: New tools at the Candida Genome Database: biochemical pathways and full-text literature search.
abstract: The Candida Genome Database (CGD, http://www.candidagenome.org/) provides online access to genomic sequence data and manually curated functional information about genes and proteins of the human pathogen Candida albicans. Herein, we describe two recently added features, Candida Biochemical Pathways and the Textpresso full-text literature search tool. The Biochemical Pathways tool provides visualization of metabolic pathways and analysis tools that facilitate interpretation of experimental data, including results of large-scale experiments, in the context of Candida metabolism. Textpresso for Candida allows searching through the full-text of Candida-specific literature, including clinical and epidemiological studies.
authors.affiliation: Department of Genetics, Stanford University Medical School, Stanford, CA 94305-5120, USA.
authors.forename: Marek S
authors.initials: MS
authors.lastname: Skrzypek
authors.forename: Martha B
authors.initials: MB
authors.lastname: Arnaud
authors.forename: Maria C
authors.initials: MC
authors.lastname: Costanzo
authors.forename: Diane O
authors.initials: DO
authors.lastname: Inglis
authors.forename: Prachi
authors.initials: P
authors.lastname: Shah
authors.forename: Gail
authors.initials: G
authors.lastname: Binkley
authors.forename: Stuart R
authors.initials: SR
authors.lastname: Miyasato
authors.forename: Gavin
authors.initials: G
authors.lastname: Sherlock
mesh_terms: D002176:Candida albicans / Q000235:genetics*; D019295:Computational Biology / Q000379:methods* / Q000639:trends; D004271:DNA, Fungal / Q000235:genetics; D030541:Databases, Genetic; D030561:Databases, Nucleic Acid; D030562:Databases, Protein; D005800:Genes, Fungal; D016681:Genome, Fungal; D016247:Information Storage and Retrieval / Q000379:methods; D020407:Internet; D016366:Open Reading Frames; D017434:Protein Structure, Tertiary; D012984:Software; D014584:User-Computer Interface
chemical_list: D004271:DNA, Fungal