title: A grass molecular identification system for forensic botany: a critical evaluation of the strengths and limitations.
abstract: Plant material is frequently encountered in criminal investigations but often overlooked as potential evidence. We designed a DNA-based molecular identification system for 100 Australian grasses that consisted of a series of polymerase chain reaction assays that enabled the progressive identification of grasses to different taxonomic levels. The identification system was based on DNA sequence variation at four chloroplast and two mitochondrial loci. Seventeen informative indels and 68 single-nucleotide polymorphisms were utilized as molecular markers for subfamily to species-level identification. To identify an unknown sample to subfamily level required a minimum of four markers or nine markers for species identification. The accuracy of the system was confirmed by blind tests. We have demonstrated "proof of concept" of a molecular identification system for trace botanical samples. Our evaluation suggests that the adoption of a system that combines this approach with DNA sequencing could assist the morphological identification of grasses found as forensic evidence.
authors.affiliation: School of Botany and Zoology, The Australian National University, Canberra, ACT 0200, Australia. jodiem.ward@cit.act.edu.au
authors.forename: Jodie
authors.initials: J
authors.lastname: Ward
authors.forename: Simon R
authors.initials: SR
authors.lastname: Gilmore
authors.forename: James
authors.initials: J
authors.lastname: Robertson
authors.forename: Rod
authors.initials: R
authors.lastname: Peakall
mesh_terms: D001901:Botany; D002736:Chloroplasts / Q000378:metabolism; D017931:DNA Primers; D004272:DNA, Mitochondrial / Q000235:genetics; D018744:DNA, Plant / Q000235:genetics*; D005554:Forensic Medicine; D005819:Genetic Markers; D006801:Humans; D006109:Poaceae / Q000235:genetics*; D016133:Polymerase Chain Reaction; D020641:Polymorphism, Single Nucleotide; D017422:Sequence Analysis, DNA; D013045:Species Specificity
chemical_list: D017931:DNA Primers; D004272:DNA, Mitochondrial; D018744:DNA, Plant; D005819:Genetic Markers