title: Assessment of phylloplane yeasts on selected Mediterranean plants by FISH with group- and species-specific oligonucleotide probes.
abstract: A previous culture-dependent survey of phylloplane yeasts from selected Mediterranean plants showed that a few species were present in high densities in almost all leaf samples, regardless of the plant type, location or sampling season. However, a few species appeared to be restricted to Cistus albidus leaves, namely Cryptococcus cistialbidi. Here, we describe a culture-independent FISH assay to detect and quantify whole yeast cells in leaf washings. After optimization, the technique was used to check the apparent association between C. albidus leaves and C. cistialbidi and the abundance and ubiquity of other basidiomycetous yeast species such as Erythrobasidium hasegawianum and Sporobolomyces spp. in leaf samples from this and other neighboring plants (Acer monspessulanum and Quercus faginea). No yeast cells were detected in Pistacia lentiscus leaf samples. We were also able to demonstrate that three phylloplane yeasts (C. cistialbidi, E. hasegawianum and Sporobolomyces spp.) appeared to be log-normally distributed among individual C. albidus leaves. The log-normal distribution has important implications for the quantification of phylloplane yeasts based on the washing and plating of bulk leaf samples, which will tend to overestimate the size of the respective populations and become an error source in yeast surveys or related biocontrol studies.
authors.affiliation: Centro de Recursos Microbiológicos (CREM), Departamento de Ciências da Vida, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Caparica, Portugal. joao.inacio@lniv.min-agricultura.pt
authors.forename: João
authors.initials: J
authors.lastname: Inácio
authors.forename: Wolfgang
authors.initials: W
authors.lastname: Ludwig
authors.forename: Isabel
authors.initials: I
authors.lastname: Spencer-Martins
authors.forename: Alvaro
authors.initials: A
authors.lastname: Fonseca
mesh_terms: D017404:In Situ Hybridization, Fluorescence / Q000379:methods*; D019083:Mediterranean Region; D015345:Oligonucleotide Probes; D018515:Plant Leaves / Q000382:microbiology; D010944:Plants / Q000382:microbiology*; D013045:Species Specificity; D015003:Yeasts / Q000145:classification* / Q000166:cytology / Q000302:isolation & purification*
chemical_list: D015345:Oligonucleotide Probes