New clustering module in BDPC bisulfite sequencing data presentation and compilation web application for DNA methylation analyses.
The Bisulfite Sequencing Data Presentation and Compilation (BDPC) web interface for compilation and presentation of data from bisulfite sequencing DNA methylation studies has been improved by adding a new module. This module allows visualization of the whole data set in form of a heatmap of DNA methylation levels and clustering and comparison of tissue methylation patterns. It can also be used for data not processed by BDPC. In addition, several functions of the existing BDPC compilation module have been improved.
Rohde
Christian
C
School of Engineering and Science, Jacobs University Bremen, Bremen, Germany.
Zhang
Yingying
Y
Stamerjohanns
Heinrich
H
Hecher
Kurt
K
Reinhardt
Richard
R
Jeltsch
Albert
A
D002460:Cell Line; D016000:Cluster Analysis; D019175:DNA Methylation; D006801:Humans; D017422:Sequence Analysis, DNA / Q000379:methods*; D013447:Sulfites / Q000737:chemistry*
D013447:Sulfites; C042345:hydrogen sulfite