ENCODE whole-genome data in the UCSC Genome Browser.
The Encyclopedia of DNA Elements (ENCODE) project is an international consortium of investigators funded to analyze the human genome with the goal of producing a comprehensive catalog of functional elements. The ENCODE Data Coordination Center at The University of California, Santa Cruz (UCSC) is the primary repository for experimental results generated by ENCODE investigators. These results are captured in the UCSC Genome Bioinformatics database and download server for visualization and data mining via the UCSC Genome Browser and companion tools (Rhead et al. The UCSC Genome Browser Database: update 2010, in this issue). The ENCODE web portal at UCSC (http://encodeproject.org or http://genome.ucsc.edu/ENCODE) provides information about the ENCODE data and convenient links for access.
Rosenbloom
Kate R
KR
Center for Biomolecular Science and Engineering, School of Engineering, University of California, Santa Cruz, CA 95064, USA. kate@soe.ucsc.edu
Dreszer
Timothy R
TR
Pheasant
Michael
M
Barber
Galt P
GP
Meyer
Laurence R
LR
Pohl
Andy
A
Raney
Brian J
BJ
Wang
Ting
T
Hinrichs
Angie S
AS
Zweig
Ann S
AS
Fujita
Pauline A
PA
Learned
Katrina
K
Rhead
Brooke
B
Smith
Kayla E
KE
Kuhn
Robert M
RM
Karolchik
Donna
D
Haussler
David
D
Kent
W James
WJ
D000818:Animals; D045744:Cell Line, Tumor; D019295:Computational Biology / Q000379:methods* / Q000639:trends; D030541:Databases, Genetic; D030561:Databases, Nucleic Acid; D015894:Genome, Human; D023281:Genomics; D006801:Humans; D016247:Information Storage and Retrieval / Q000379:methods; D020407:Internet; D051379:Mice; D016415:Sequence Alignment; D012984:Software