title: Spectroscopic analyses of the biofuels-critical phytochemical coniferyl alcohol and its enzyme-catalyzed oxidation products.
abstract: Lignin composition (monolignol types of coniferyl, sinapyl or p-coumaryl alcohol) is causally related to biomass recalcitrance. We describe multiwavelength (220, 228, 240, 250, 260, 290, 295, 300, 310 or 320 nm) absorption spectroscopy of coniferyl alcohol and its laccase- or peroxidase-catalyzed products during real time kinetic, pseudokinetic and endpoint analyses, in optical turn on or turn off modes, under acidic or basic conditions. Reactions in microwell plates and 100 microL volumes demonstrated assay miniaturization and high throughput screening capabilities. Bathochromic and hypsochromic shifts along with hyperchromicity or hypochromicity accompanied enzymatic oxidations by laccase or peroxidase. The limits of detection and quantitation of coniferyl alcohol averaged 2.4 and 7.1 muM respectively, with linear trend lines over 3 to 4 orders of magnitude. Coniferyl alcohol oxidation was evident within 10 minutes or with 0.01 microg/mL laccase and 2 minutes or 0.001 microg/mL peroxidase. Detection limit improved to 1.0 microM coniferyl alcohol with Km of 978.7 +/- 150.7 microM when examined at 260 nm following 30 minutes oxidation with 1.0 microg/mL laccase. Our assays utilized the intrinsic spectroscopic properties of coniferyl alcohol or its oxidation products for enabling detection, without requiring chemical synthesis or modification of the substrate or product(s). These studies facilitate lignin compositional analyses and augment pretreatment strategies for reducing biomass recalcitrance.
authors.affiliation: Joint BioEnergy Institute (JBEI), Emeryville, CA 94550, USA. kachyut@sandia.gov
authors.forename: Komandoor Elayavalli
authors.initials: KE
authors.lastname: Achyuthan
authors.forename: Paul David
authors.initials: PD
authors.lastname: Adams
authors.forename: Blake Alexander
authors.initials: BA
authors.lastname: Simmons
authors.forename: Anup Kumar
authors.initials: AK
authors.lastname: Singh
mesh_terms: D056804:Biofuels; D002384:Catalysis; D042845:Laccase / Q000378:metabolism*; D008031:Lignin / Q000737:chemistry; D010084:Oxidation-Reduction; D010544:Peroxidases / Q000378:metabolism*; D010636:Phenols / Q000737:chemistry* / Q000378:metabolism*
chemical_list: D056804:Biofuels; D010636:Phenols; D008031:Lignin; C010559:coniferyl alcohol; D042845:Laccase; D010544:Peroxidases