title: Structural changes in bacteriorhodopsin in purple membranes induced by irreversible photobleaching with heterogeneous and homogeneous stability.
abstract: Kinetic studies of irreversible photobleaching of bacteriorhodopsin (bR) in purple membrane (PM) at neutral pH have previously indicated the existence of two kinds of species which differ in their structural stability. bR was shown to have kinetically slow- and fast-decayed components with the faster one increasing with changes in intra- and intermolecular structures in darkness. However, our recent work reported that photobleaching kinetics above pH 10 were characterized by a single-decay component. In order to elucidate the factors responsible for the heterogeneous or homogeneous stability of photobleaching, we conducted investigations into the structural changes in bR in PM induced by photobleaching at pH 7 and 11 by attenuated total reflection Fourier transform infrared (ATR-FTIR) spectroscopy. ATR-FTIR spectra of bR photobleached at pH 7 and 11 showed that an increase in IR peak intensity at 1656 cm(-1) occurred simultaneously with decreases at 1666 cm(-1), indicating an alpha(II)-to-alpha(I) transition in transmembrane helices during photobleaching. The most significant change in IR spectra occurred at 1626 cm(-1) for samples photobleached at pH 7, and was attributed to structures formed between adjacent molecules. The origin of the heterogeneity of photobleaching is discussed on the basis of structural characteristics found in the bleached membranes.
authors.affiliation: Department of Applied Physics, Graduate School of Engineering, Nagoya University, Nagoya, Aichi, Japan. yokoyama@nuap.nagoya-u.ac.jp
authors.forename: Yasunori
authors.initials: Y
authors.lastname: Yokoyama
authors.forename: Masashi
authors.initials: M
authors.lastname: Sonoyama
authors.forename: Shigeki
authors.initials: S
authors.lastname: Mitaku
mesh_terms: D001436:Bacteriorhodopsins / Q000648:ultrastructure*; D006863:Hydrogen-Ion Concentration; D008565:Membrane Proteins / Q000737:chemistry* / Q000528:radiation effects; D038761:Photobleaching; D017433:Protein Structure, Secondary; D018717:Purple Membrane / Q000737:chemistry* / Q000528:radiation effects; D017550:Spectroscopy, Fourier Transform Infrared
chemical_list: D008565:Membrane Proteins; D001436:Bacteriorhodopsins