[Sequence polymorphisms of the mitochondrial DNA HVR I and HVR II regions in the Deng populations from Tibet in China].
OBJECTIVE
To analyze the sequence polymorphisms of the mitochondrial DNA hypervariable regions I (HVR I) and HVR II in the Deng population in Linzhi area of Tibet.


METHODS
mtDNAs obtained from 119 unrelated individuals were amplified and directly sequenced.


RESULTS
One hundred and ten variable sites were identified, including nucleotide transitions, transversions, and insertions. In the HVR I region (nt16024-nt16365), 68 polymorphic sites and 119 haplotypes were observed, the genetic diversity was 0.9916. In the HVR II (nt73-nt340) region, 42 polymorphic sites and 113 haplotypes were observed, and the genetic diversity was 0.9907. The random match probability of the HVR I and HVR II regions were 0.0084 and 0.0093, respectively. When combining the HVR I and HVR II regions, 119 different haplotypes were found. The combined match probability of two unrelated persons having the same sequence was 0.0084.


CONCLUSIONS
There are some unique polymorphic loci in the Deng population. There are different genetic structures between Chinese and other Asian populations in the mitochondrial DNA D-loop region. Sequence polymorphism of mitochondrial DNA HVR I and HVR II can be used as a genetic marker for forensic individual identification and genetic analysis.
Kang
Longli
L
Laboratory of Life Science, Key Laboratory of Plateau Environment and Genes Related to Diseases of Tibet, Ministry of Education, Tibet Nationality College, Xianyang Shanxi, 712082 PR China. klongli@163.com
Zhang
Xiaofeng
X
Liu
Kai
K
Zhao
Jianmin
J
D044466:Asian People / Q000208:ethnology* / Q000235:genetics*; D001483:Base Sequence; D002681:China; D022801:Complementarity Determining Regions; D004272:DNA, Mitochondrial / Q000235:genetics*; D005260:Female; D006801:Humans; D008297:Male; D008969:Molecular Sequence Data; D010375:Pedigree; D011110:Polymorphism, Genetic; D018609:Tibet
D022801:Complementarity Determining Regions; D004272:DNA, Mitochondrial