title: The mycobacterial MsDps2 protein is a nucleoid-forming DNA binding protein regulated by sigma factors sigma and sigma.
abstract: The Dps (DNA-binding protein from starved cells) proteins from Mycobacterium smegmatis MsDps1 and MsDps2 are both DNA-binding proteins with some differences. While MsDps1 has two oligomeric states, with one of them responsible for DNA binding, MsDps2 has only one DNA-binding oligomeric state. Both the proteins however, show iron-binding activity. The MsDps1 protein has been shown previously to be induced under conditions of starvation and osmotic stress and is regulated by the extra cellular sigma factors sigma(H) and sigma(F). We show here, that the second Dps homologue in M. smegmatis, namely MsDps2, is purified in a DNA-bound form and exhibits nucleoid-like structures under the atomic force microscope. It appears that the N-terminal sequence of Dps2 plays a role in nucleoid formation. MsDps2, unlike MsDps1, does not show elevated expression in nutritionally starved or stationary phase conditions; rather its promoter is recognized by RNA polymerase containing sigma(A) or sigma(B), under in vitro conditions. We propose that due to the nucleoid-condensing ability, the expression of MsDps2 is tightly regulated inside the cells.
authors: Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India.
authors: Ramachandran
authors: R
authors: Saraswathi
authors: Rakhi
authors: R
authors: Pait Chowdhury
authors: Sunanda Margrett
authors: SM
authors: Williams
authors: Payel
authors: P
authors: Ghatak
authors: Dipankar
authors: D
authors: Chatterji
mesh_terms: D001426:Bacterial Proteins / Q000378:metabolism; D002138:Calibration; D019295:Computational Biology / Q000379:methods; D004247:DNA / Q000737:chemistry* / Q000378:metabolism; D004268:DNA-Binding Proteins / Q000737:chemistry* / Q000378:metabolism; D012321:DNA-Directed RNA Polymerases / Q000378:metabolism; D015964:Gene Expression Regulation, Bacterial; D018625:Microscopy, Atomic Force / Q000379:methods; D020102:Mycobacterium smegmatis / Q000378:metabolism*; D009995:Osmosis; D010802:Phylogeny; D011401:Promoter Regions, Genetic; D017434:Protein Structure, Tertiary; D012808:Sigma Factor / Q000737:chemistry*; D014158:Transcription, Genetic
chemical_list: D001426:Bacterial Proteins; D004268:DNA-Binding Proteins; C083911:DPS protein, Bacteria; D012808:Sigma Factor; D004247:DNA; D012321:DNA-Directed RNA Polymerases