title: The PeptideAtlas Project.
abstract: PeptideAtlas is a multi-species compendium of peptides observed with tandem mass spectrometry methods. Raw mass spectrometer output files are collected from the community and reprocessed through a uniform analysis and validation pipeline that continues to advance. The results are loaded into a database and the information derived from the raw data is returned to the community via several web-based data exploration tools. The PeptideAtlas resource is useful for experiment planning, improving genome annotation, and other data mining projects. PeptideAtlas has become especially useful for planning targeted proteomics experiments.
authors.affiliation: Institute for Systems Biology, Seattle, WA, USA. edeutsch@systemsbiology.org
authors.forename: Eric W
authors.initials: EW
authors.lastname: Deutsch
mesh_terms: D057225:Data Mining; D030541:Databases, Genetic; D016678:Genome; D023281:Genomics / Q000379:methods; D010455:Peptides / Q000032:analysis* / Q000235:genetics; D020543:Proteome / Q000032:analysis / Q000235:genetics; D040901:Proteomics / Q000379:methods*; D053719:Tandem Mass Spectrometry / Q000379:methods
chemical_list: D010455:Peptides; D020543:Proteome