title: sORF finder: a program package to identify small open reading frames with high coding potential.
abstract: CONCLUSIONS
  sORF finder is a program package for identifying small open reading frames (sORFs) with high-coding potential. This application allows the identification of coding sORFs according to the nucleotide composition bias among coding sequences and the potential functional constraint at the amino acid level through evaluation of synonymous and non-synonymous substitution rates.
  
  
  BACKGROUND
  Online tools and source codes are freely available at http://evolver.psc.riken.jp/.
  
  
  BACKGROUND
  Supplementary data are available at Bioinformatics online.
authors.affiliation: Plant Science Center, RIKEN, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan. kohanada@psc.riken.jp
authors.forename: Kousuke
authors.initials: K
authors.lastname: Hanada
authors.forename: Kenji
authors.initials: K
authors.lastname: Akiyama
authors.forename: Tetsuya
authors.initials: T
authors.lastname: Sakurai
authors.forename: Tetsuro
authors.initials: T
authors.lastname: Toyoda
authors.forename: Kazuo
authors.initials: K
authors.lastname: Shinozaki
authors.forename: Shin-Han
authors.initials: SH
authors.lastname: Shiu
mesh_terms: D000595:Amino Acid Sequence; D019295:Computational Biology / Q000379:methods*; D030541:Databases, Genetic; D016366:Open Reading Frames; D012984:Software