title: Proteomic profiling of the retinal dysplasia and degeneration chick retina.
abstract: OBJECTIVE
  In our previous paper we undertook proteomic analysis of the normal developing chick retina to identify proteins that were differentially expressed during retinal development. In the present paper we use the same proteomic approach to analyze the development and onset of degeneration in the retinal dysplasia and degeneration (rdd) chick. The pathology displayed by the rdd chick resembles that observed in some of the more severe forms of human retinitis pigmentosa.
  
  
  METHODS
  Two-dimensional gel electrophoresis (pH 4-7), gel image analysis, and mass spectrometry were used to profile the developing and degenerating retina of the rdd and wild-type (wt) chick retina.
  
  
  RESULTS
  Several proteins were identified by mass spectrometry that displayed differential expression between normal and rdd retina between embryonic day 12 (E12) and post-hatch day 1 (P1). Secernin 1 displayed the most significant variation in expression between rdd and wt retina; this may be due to differential phosphorylation in the rdd retina. Secernin 1 has dipeptidase activity and has been demonstrated to play a role in exocytosis; it has been shown to be overexpressed in certain types of cancer and has also been suggested as a potential neurotoxicologically relevant target. Its role in the retina and in particular its differential expression in the degenerate rdd retina remains unknown and will require further investigation. Other proteins that were differentially expressed in the rdd retina included valosin-containing protein, beta-synuclein, stathmin 1, nucleoside diphosphate kinase, histidine triad nucleotide-binding protein, and 40S ribosomal protein S12. These proteins are reported to be involved in several cellular processes, including the ubiquitin proteasome pathway, neuroprotection, metastatic suppression, transcriptional and translational regulation, and regulation of microtubule dynamics.
  
  
  CONCLUSIONS
  This proteomic study is the first such investigation of the rdd retina and represents a unique data set that has revealed several proteins that are differentially expressed during retinal degeneration in the rdd chick. Secernin 1 showed the most significant differences in expression during this degeneration period. Further investigation of the proteins identified may provide insight into the complex events underlying retinal degeneration in this animal model.
authors.affiliation: Centre for Vision Sciences, Institute of Clinical Science, Queen's University of Belfast, Belfast, Northern Ireland, UK.
authors.forename: Sorcha
authors.initials: S
authors.lastname: Finnegan
authors.forename: Joanne
authors.initials: J
authors.lastname: Robson
authors.forename: Paul M
authors.initials: PM
authors.lastname: Hocking
authors.forename: Manir
authors.initials: M
authors.lastname: Ali
authors.forename: Chris F
authors.initials: CF
authors.lastname: Inglehearn
authors.forename: Alan
authors.initials: A
authors.lastname: Stitt
authors.forename: William J
authors.initials: WJ
authors.lastname: Curry
mesh_terms: D000818:Animals; D002645:Chickens; D015180:Electrophoresis, Gel, Two-Dimensional; D005136:Eye Proteins / Q000737:chemistry / Q000378:metabolism; D013058:Mass Spectrometry; D009419:Nerve Tissue Proteins / Q000378:metabolism; D040901:Proteomics; D012160:Retina / Q000378:metabolism* / Q000473:pathology*; D012162:Retinal Degeneration / Q000150:complications* / Q000378:metabolism*; D015792:Retinal Dysplasia / Q000150:complications* / Q000378:metabolism*
chemical_list: D005136:Eye Proteins; D009419:Nerve Tissue Proteins