Sphingobacterium bambusae sp. nov., isolated from soil of bamboo plantation.
A Gram-negative, non-motile, non-spore-forming bacterial strain designated IBFC2009(T) was isolated from soil of a bamboo plantation. The strain could grow at 11 degrees C approximately 39 degrees C, pH 6.0-9.0, and in the presence of 0 approximately 5% NaCl. Based on 16S rRNA gene sequence analysis, Strain IBFC2009(T) belonged to the genus Sphingobacterium and showed the highest sequence similarity of 94.6% (S. composti T5-12(T)) with the type strains within the genus. The major fatty acids were summed feature 3 (iso-C(15:0) 2-OH and/or C(16:1) omega7c, 34.4%), iso-C(15:0) (22.4%), C(16:0) 3-OH (15.2%), and iso-C(17:0) 3-OH (12.8%). The G+C content of the genomic DNA was 41.0 mol%. According to the phenotypic and genotypic characteristics, Strain IBFC2009(T) should represent a novel species of the genus Sphingobacterium, for which the name Sphingobacterium bambusae sp. nov. is proposed. The type strain is IBFC2009(T) (=CCTCC AB 209162(T) =KCTC 22814(T)).
Duan
Shengwen
S
Institute of Bast Fiber Crops, Chinese Academy of Agriculture Sciences, Hunan 410205, PR China.
Liu
Zhengchu
Z
Feng
Xiangyuan
X
Zheng
Ke
K
Cheng
Lifeng
L
D015373:Bacterial Typing Techniques; D001482:Base Composition; D016000:Cluster Analysis; D004269:DNA, Bacterial / Q000737:chemistry / Q000235:genetics; D004275:DNA, Ribosomal / Q000737:chemistry / Q000235:genetics; D005227:Fatty Acids / Q000032:analysis; D006863:Hydrogen-Ion Concentration; D008969:Molecular Sequence Data; D010802:Phylogeny; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D017422:Sequence Analysis, DNA; D012965:Sodium Chloride / Q000378:metabolism; D012988:Soil Microbiology; D045249:Sphingobacterium / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification* / Q000502:physiology; D013696:Temperature
D004269:DNA, Bacterial; D004275:DNA, Ribosomal; D005227:Fatty Acids; D012336:RNA, Ribosomal, 16S; D012965:Sodium Chloride