title: Phenotype MicroArray in the metabolic characterisation of Salmonella serotypes Agona, Enteritidis, Give, Hvittingfoss, Infantis, Newport and Typhimurium.
abstract: The Phenotype MicroArray (PM) technology was used to study the metabolic characteristics of 29 Salmonella strains belonging to seven serotypes of S. enterica spp. enterica. Strains of serotypes Typhimurium (six strains among definite phage types DTs 1, 40 and 104) and Agona (two strains) were tested for 949 substrates, Enteritidis (six strains of phage type PT1), Give, Hvittingfoss, Infantis and Newport strains (two of each) were tested for 190 substrates and seven other Agona strains for 95 substrates. The strains represented 18 genotypes in pulsed-field gel electrophoresis (PFGE). Among 949 substrates, 18 were identified that could be used to differentiate between the strains of those seven serotypes or within a single serotype. Unique metabolic differences between the Finnish endemic Typhimurium DT1 and Agona strains were detected, for example, in the metabolism of D-tagatose, D-galactonic acid gamma-lactone and L-proline as a carbon source. Thus, the PM technique is a useful tool for identifying potential differential markers on a metabolic basis that could be used for epidemiological surveillance.
authors.affiliation: Bacteriology Unit, Department of Infectious Diseases Surveillance and Control, National Institute for Health and Welfare (THL), P.O. Box 30, 00271 Helsinki, Finland.
authors.forename: T
authors.initials: T
authors.lastname: Kauko
authors.forename: K
authors.initials: K
authors.lastname: Haukka
authors.forename: M
authors.initials: M
authors.lastname: Abuoun
authors.forename: M F
authors.initials: MF
authors.lastname: Anjum
authors.forename: M J
authors.initials: MJ
authors.lastname: Woodward
authors.forename: A
authors.initials: A
authors.lastname: Siitonen
mesh_terms: D019540:Area Under Curve; D002244:Carbon / Q000378:metabolism; D003470:Culture Media / Q000378:metabolism; D006863:Hydrogen-Ion Concentration; D053858:Metabolic Networks and Pathways; D055442:Metabolome; D020411:Oligonucleotide Array Sequence Analysis / Q000379:methods*; D010641:Phenotype; D012475:Salmonella / Q000145:classification / Q000378:metabolism*; D012492:Salts / Q000737:chemistry; D012703:Serotyping / Q000379:methods
chemical_list: D003470:Culture Media; D012492:Salts; D002244:Carbon