Census of the viral metagenome within an activated sludge microbial assemblage.
The viral metagenome within an activated sludge microbial assemblage was sampled using culture-dependent and culture-independent methods and compared to the diversity of activated sludge bacterial taxa. A total of 70 unique cultured bacterial isolates, 24 cultured bacteriophages, 829 bacterial metagenomic clones of 16S rRNA genes, and 1,161 viral metagenomic clones were subjected to a phylogenetic analysis.
Parsley
Larissa C
LC
Department of Biological Sciences, Auburn University, Auburn, AL 368491, USA.
Consuegra
Erin J
EJ
Thomas
Stephen J
SJ
Bhavsar
Jaysheel
J
Land
Andrew M
AM
Bhuiyan
Nadia N
NN
Mazher
Mustafa A
MA
Waters
Robert J
RJ
Wommack
K Eric
KE
Harper
Willie F
WF
Liles
Mark R
MR
D001419:Bacteria / Q000145:classification* / Q000235:genetics* / Q000302:isolation & purification; D001435:Bacteriophages / Q000145:classification / Q000235:genetics / Q000302:isolation & purification; D044822:Biodiversity; D016000:Cluster Analysis; D004269:DNA, Bacterial / Q000737:chemistry / Q000235:genetics; D004279:DNA, Viral / Q000737:chemistry / Q000235:genetics; D054892:Metagenome; D008969:Molecular Sequence Data; D010802:Phylogeny; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D017422:Sequence Analysis, DNA; D012722:Sewage / Q000821:virology*; D014776:Virus Cultivation; D014780:Viruses / Q000145:classification* / Q000235:genetics* / Q000302:isolation & purification
D004269:DNA, Bacterial; D004279:DNA, Viral; D012336:RNA, Ribosomal, 16S; D012722:Sewage