A repulsive electrostatic mechanism for protein export through the type III secretion apparatus.
Many Gram-negative bacteria initiate infections by injecting effector proteins into host cells through the type III secretion apparatus, which is comprised of a basal body, a needle, and a tip. The needle channel is formed by the assembly of a single needle protein. To explore the export mechanisms of MxiH needle protein through the needle of Shigella flexneri, an essential step during needle assembly, we have performed steered molecular dynamics simulations in implicit solvent. The trajectories reveal a screwlike rotation motion during the export of nativelike helix-turn-helix conformations. Interestingly, the channel interior with excessive electronegative potential creates an energy barrier for MxiH to enter the channel, whereas the same may facilitate the ejection of the effectors into host cells. Structurally known basal regions and ATPase underneath the basal region also have electronegative interiors. Effector proteins also have considerable electronegative potential patches on their surfaces. From these observations, we propose a repulsive electrostatic mechanism for protein translocation through the type III secretion apparatus. Based on this mechanism, the ATPase activity and/or proton motive force could be used to energize the protein translocation through these nanomachines. A similar mechanism may be applicable to macromolecular channels in other secretion systems or viruses through which proteins or nucleic acids are transported.
Rathinavelan
Thenmalarchelvi
T
Department of Molecular Biosciences, The University of Kansas, Lawrence, Kansas, USA.
Zhang
Lingling
L
Picking
Wendy L
WL
Weis
David D
DD
De Guzman
Roberto N
RN
Im
Wonpil
W
D000251:Adenosine Triphosphatases / Q000737:chemistry / Q000378:metabolism; D000465:Algorithms; D001426:Bacterial Proteins / Q000737:chemistry* / Q000235:genetics / Q000378:metabolism; D002712:Chlorides / Q000737:chemistry; D004548:Elasticity; D019077:Helix-Turn-Helix Motifs; D008958:Models, Molecular; D056004:Molecular Dynamics Simulation; D009038:Motion; D009154:Mutation; D011487:Protein Conformation; D012399:Rotation; D012492:Salts / Q000737:chemistry; D012763:Shigella flexneri; D055672:Static Electricity; D014741:Video Recording
D001426:Bacterial Proteins; D002712:Chlorides; C413572:MxiH protein, Shigella; D012492:Salts; D000251:Adenosine Triphosphatases