Phybase: an R package for species tree analysis.
BACKGROUND
Phybase is an R package for phylogenetic analysis using species trees. It provides functions to read, write, manipulate, simulate, estimate, summarize and plot species trees, which contain not only the topology and branch lengths but also population sizes.


BACKGROUND
The Phybase package is available at the R repository. The manual and supporting materials including source code, sample R code and sample data files for the species tree analysis are available at http://stat.osu.edu/~liuliang/research/phybase.html.
Liu
Liang
L
Department of Agriculture and Natural resources, Delaware State University, Dover, DE 19901, USA. lliu@desu.edu
Yu
Lili
L
D019295:Computational Biology / Q000379:methods*; D010802:Phylogeny; D011156:Population Density; D011381:Programming Languages; D012984:Software