PanCGHweb: a web tool for genotype calling in pangenome CGH data.
A pangenome is the total of genes present in strains of the same species. Pangenome microarrays allow determining the genomic content of bacterial strains more accurately than conventional comparative genome hybridization microarrays. PanCGHweb is the first tool that effectively calls genotype based on pangenome microarray data.


BACKGROUND
PanCGHweb, the web tool is accessible from: http://bamics2.cmbi.ru.nl/websoftware/pancgh/.
Bayjanov
Jumamurat R
JR
Radboud University Medical Centre, Nijmegen Center for Molecular Life Sciences, Nijmegen, The Netherlands.
Siezen
Roland J
RJ
van Hijum
Sacha A F T
SA
D000465:Algorithms; D019295:Computational Biology / Q000379:methods*; D014644:Genetic Variation; D016678:Genome; D023281:Genomics; D005838:Genotype; D020407:Internet; D013294:Lactococcus lactis / Q000235:genetics; D008957:Models, Genetic; D009693:Nucleic Acid Hybridization; D020411:Oligonucleotide Array Sequence Analysis; D016366:Open Reading Frames; D010802:Phylogeny; D017422:Sequence Analysis, DNA; D012984:Software