Hidden Markov models in biology.
Markov and Hidden Markov models (HMMs) are introduced using examples from linkage mapping and sequence analysis. In the course, the forward-backward, the Viterbi, the Baum-Welch (EM) algorithm, and a Metropolis sampling scheme are presented.
Vogl
Claus
C
Institute of Animal Breeding and Genetics, University of Veterinary Medicine Vienna, Vienna, Austria.
Futschik
Andreas
A
D000465:Algorithms; D000818:Animals; D001185:Artificial Intelligence; D002874:Chromosome Mapping; D019295:Computational Biology; D057225:Data Mining; D030541:Databases, Genetic; D008040:Genetic Linkage; D006801:Humans; D016013:Likelihood Functions; D008390:Markov Chains; D015233:Models, Statistical; D017422:Sequence Analysis, DNA