Agarivorans gilvus sp. nov. isolated from seaweed.
A novel agarase-producing, non-endospore-forming marine bacterium, WH0801(T), was isolated from a fresh seaweed sample collected from the coast of Weihai, China. Preliminary characterization based on 16S rRNA gene sequence analysis showed that WH0801(T) shared 96.1  % similarity with Agarivorans albus MKT 106(T), the type species of the genus Agarivorans. A polyphasic taxonomic study was conducted and confirmed the phylogenetic affiliation of strain WH0801(T) to the genus Agarivorans. Isolate WH0801(T) produces light-yellow-pigmented colonies; cells are Gram-stain-negative, straight or curved rods, which are motile with a single polar flagellum. Strain WH0801(T) grew in 0.5-5  % NaCl, with optimum growth at 3  % NaCl, and its optimal pH and cultivation temperature were 8.4-8.6 and 28-32 °C, respectively. Data from biochemical tests, whole-cell fatty acid profiling, 16S rRNA gene sequence studies and DNA-DNA hybridization clearly indicated that isolate WH0801(T) represented a novel species within the genus Agarivorans, for which the name Agarivorans gilvus sp. nov. is proposed. The type strain of Agarivorans gilvus sp. nov. is WH0801(T) (=NRRL B-59247(T) =CGMCC 1.10131(T)).
Du
Zong-Jun
ZJ
State Key Laboratory of Microbial Technology, Shandong University, Jinan 250100, PR China.|College of Marine Science, Shandong University at Weihai, Weihai 264209, PR China.
Lv
Guo-Qiang
GQ
College of Marine Science, Shandong University at Weihai, Weihai 264209, PR China.
Rooney
Alejandro P
AP
National Center for Agricultural Utilization Research, Agricultural Research Service, US Department of Agriculture, 1815 North University Street, Peoria, IL 61604, USA.
Miao
Ting-Ting
TT
College of Marine Science, Shandong University at Weihai, Weihai 264209, PR China.
Xu
Qing-Qiang
QQ
College of Marine Science, Shandong University at Weihai, Weihai 264209, PR China.
Chen
Guan-Jun
GJ
State Key Laboratory of Microbial Technology, Shandong University, Jinan 250100, PR China.|College of Marine Science, Shandong University at Weihai, Weihai 264209, PR China.
D034241:Alteromonadaceae / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification* / Q000502:physiology; D015373:Bacterial Typing Techniques; D002681:China; D016000:Cluster Analysis; D004269:DNA, Bacterial / Q000737:chemistry / Q000235:genetics; D004275:DNA, Ribosomal / Q000737:chemistry / Q000235:genetics; D005227:Fatty Acids / Q000032:analysis; D006026:Glycoside Hydrolases / Q000378:metabolism; D008969:Molecular Sequence Data; D009693:Nucleic Acid Hybridization; D010802:Phylogeny; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D012624:Seaweed / Q000382:microbiology*; D017422:Sequence Analysis, DNA
D004269:DNA, Bacterial; D004275:DNA, Ribosomal; D005227:Fatty Acids; D012336:RNA, Ribosomal, 16S; D006026:Glycoside Hydrolases; C019624:agarase