title: Arabidopsis tiling array analysis to identify the stress-responsive genes.
abstract: Plants respond and adapt to drought, cold, and high-salinity stresses. Stress-inducible gene products function in the stress response and tolerance in plants. Using cDNA microarrays and oligonucleotide microarrays, stress-inducible genes have been identified in various plant species so far. Recently, tiling array technology has become a powerful tool for the whole-genome transcriptome analysis. We applied the Arabidopsis Affymetrix tiling arrays to study the whole-genome transcriptome under drought, cold, and high-salinity stresses and identified a large number of drought, cold, and high-salinity stress-inducible genes and transcriptional units (TUs).
authors.affiliation: Plant Genomic Network Research Team, Plant Functional Genomics Research Group, RIKEN Plant Science Center, Yokohama, Japan.
authors.forename: Akihiro
authors.initials: A
authors.lastname: Matsui
authors.forename: Junko
authors.initials: J
authors.lastname: Ishida
authors.forename: Taeko
authors.initials: T
authors.lastname: Morosawa
authors.forename: Masanori
authors.initials: M
authors.lastname: Okamoto
authors.forename: Jong-Myong
authors.initials: JM
authors.lastname: Kim
authors.forename: Yukio
authors.initials: Y
authors.lastname: Kurihara
authors.forename: Makiko
authors.initials: M
authors.lastname: Kawashima
authors.forename: Maho
authors.initials: M
authors.lastname: Tanaka
authors.forename: Taiko Kim
authors.initials: TK
authors.lastname: To
authors.forename: Kentaro
authors.initials: K
authors.lastname: Nakaminami
authors.forename: Eli
authors.initials: E
authors.lastname: Kaminuma
authors.forename: Takaho A
authors.initials: TA
authors.lastname: Endo
authors.forename: Yoshiki
authors.initials: Y
authors.lastname: Mochizuki
authors.forename: Shuji
authors.initials: S
authors.lastname: Kawaguchi
authors.forename: Norio
authors.initials: N
authors.lastname: Kobayashi
authors.forename: Kazuo
authors.initials: K
authors.lastname: Shinozaki
authors.forename: Tetsuro
authors.initials: T
authors.lastname: Toyoda
authors.forename: Motoaki
authors.initials: M
authors.lastname: Seki
mesh_terms: D017360:Arabidopsis / Q000235:genetics*; D001710:Biotin / Q000378:metabolism; D019295:Computational Biology; D018076:DNA, Complementary / Q000096:biosynthesis; D055864:Droughts; D018506:Gene Expression Regulation, Plant; D017343:Genes, Plant / Q000235:genetics*; D020411:Oligonucleotide Array Sequence Analysis / Q000379:methods*; D018075:RNA, Complementary / Q000235:genetics; D018749:RNA, Plant / Q000235:genetics / Q000302:isolation & purification; D013194:Staining and Labeling; D013312:Stress, Physiological / Q000235:genetics*; D014158:Transcription, Genetic
chemical_list: D018076:DNA, Complementary; D018075:RNA, Complementary; D018749:RNA, Plant; D001710:Biotin