Association analysis of the RET proto-oncogene with Hirschsprung disease in the Han Chinese population of southeastern China.
Hirschsprung disease (HSCR) is a complex congenital disorder characterized by intestinal obstructions caused by the absence of the intestinal ganglion cells of the nerve plexuses in variable lengths of the digestive tract. This study investigated a possible role of the RET proto-oncogene in sporadic HSCR patients in the Han Chinese population. Our results indicated that rs1800858, rs1800860, rs1800863, and rs2075912, located in exons 2, 7, 15, and intron 19 of RET, are strongly associated with the disease (P < 0.01), with rs1800860 and rs1800863 playing a protective role in the pathogenesis of HSCR in the Chinese population. We also showed that the haplotype consisting of four SNPs is significantly associated with HSCR. We did not find a significant difference in the CA-repeat in intron 5 of RET between cases and controls. Our study provided further evidence that the RET gene is involved in the susceptibility to HSCR in the Han Chinese population.
Liu
Cui-Ping
CP
Institute of Cell Biology, Zhejiang University, Hangzhou, Zhejiang Province, China.
Tang
Qian-Qian
QQ
Lou
Jin-Tu
JT
Luo
Chun-Fen
CF
Zhou
Xue-Wu
XW
Li
Dong-Mei
DM
Chen
Fei
F
Li
Xiang
X
Li
Ji-Cheng
JC
D044466:Asian People / Q000208:ethnology* / Q000235:genetics*; D001483:Base Sequence; D002681:China / Q000208:ethnology; D015331:Cohort Studies; D005006:Ethnicity / Q000235:genetics*; D005260:Female; D005787:Gene Frequency; D006239:Haplotypes; D006627:Hirschsprung Disease / Q000235:genetics*; D006801:Humans; D015810:Linkage Disequilibrium; D008297:Male; D018895:Microsatellite Repeats / Q000235:genetics; D020641:Polymorphism, Single Nucleotide; D000090063:Proto-Oncogene Mas; D051096:Proto-Oncogene Proteins c-ret / Q000235:genetics*
C000715470:MAS1 protein, human; D000090063:Proto-Oncogene Mas; D051096:Proto-Oncogene Proteins c-ret