title: Comprehensive survey of developmental genes in the pea aphid, Acyrthosiphon pisum: frequent lineage-specific duplications and losses of developmental genes.
abstract: Aphids exhibit unique attributes, such as polyphenisms and specialized cells to house endosymbionts, that make them an interesting system for studies at the interface of ecology, evolution and development. Here we present a comprehensive characterization of the developmental genes in the pea aphid, Acyrthosiphon pisum, and compare our results to other sequenced insects. We investigated genes involved in fundamental developmental processes such as establishment of the body plan and organogenesis, focusing on transcription factors and components of signalling pathways. We found that most developmental genes were well conserved in the pea aphid, although many lineage-specific gene duplications and gene losses have occurred in several gene families. In particular, genetic components of transforming growth factor beta (TGFbeta) Wnt, JAK/STAT (Janus kinase/signal transducer and activator of transcription) and EGF (Epidermal Growth Factor) pathways appear to have been significantly modified in the pea aphid.
authors.affiliation: HHMI and Department of Ecology and Evolutionary Biology, Princeton University, NJ, USA. shige@nibb.ac.jp <shige@nibb.ac.jp>
authors.forename: S
authors.initials: S
authors.lastname: Shigenobu
authors.forename: R D
authors.initials: RD
authors.lastname: Bickel
authors.forename: J A
authors.initials: JA
authors.lastname: Brisson
authors.forename: T
authors.initials: T
authors.lastname: Butts
authors.forename: C-C
authors.initials: CC
authors.lastname: Chang
authors.forename: O
authors.initials: O
authors.lastname: Christiaens
authors.forename: G K
authors.initials: GK
authors.lastname: Davis
authors.forename: E J
authors.initials: EJ
authors.lastname: Duncan
authors.forename: D E K
authors.initials: DE
authors.lastname: Ferrier
authors.forename: M
authors.initials: M
authors.lastname: Iga
authors.forename: R
authors.initials: R
authors.lastname: Janssen
authors.forename: G-W
authors.initials: GW
authors.lastname: Lin
authors.forename: H-L
authors.initials: HL
authors.lastname: Lu
authors.forename: A P
authors.initials: AP
authors.lastname: McGregor
authors.forename: T
authors.initials: T
authors.lastname: Miura
authors.forename: G
authors.initials: G
authors.lastname: Smagghe
authors.forename: J M
authors.initials: JM
authors.lastname: Smith
authors.forename: M
authors.initials: M
authors.lastname: van der Zee
authors.forename: R A
authors.initials: RA
authors.lastname: Velarde
authors.forename: M J
authors.initials: MJ
authors.lastname: Wilson
authors.forename: P K
authors.initials: PK
authors.lastname: Dearden
authors.forename: D L
authors.initials: DL
authors.lastname: Stern
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D001042:Aphids / Q000235:genetics* / Q000254:growth & development* / Q000472:pathogenicity; D019521:Body Patterning / Q000235:genetics; D005260:Female; D017353:Gene Deletion; D020440:Gene Duplication; D005801:Genes, Homeobox; D017344:Genes, Insect; D049750:Genome, Insect; D019476:Insect Proteins / Q000235:genetics; D008297:Male; D008969:Molecular Sequence Data; D018532:Pisum sativum / Q000469:parasitology; D010802:Phylogeny; D018160:Receptors, Cytoplasmic and Nuclear / Q000235:genetics; D017386:Sequence Homology, Amino Acid; D015398:Signal Transduction / Q000235:genetics; D014157:Transcription Factors / Q000235:genetics
chemical_list: D019476:Insect Proteins; D018160:Receptors, Cytoplasmic and Nuclear; D014157:Transcription Factors