Shifting carbon flow from roots into associated microbial communities in response to elevated atmospheric CO2.
Rising atmospheric CO(2) levels are predicted to have major consequences on carbon cycling and the functioning of terrestrial ecosystems. Increased photosynthetic activity is expected, especially for C-3 plants, thereby influencing vegetation dynamics; however, little is known about the path of fixed carbon into soil-borne communities and resulting feedbacks on ecosystem function. Here, we examine how arbuscular mycorrhizal fungi (AMF) act as a major conduit in the transfer of carbon between plants and soil and how elevated atmospheric CO(2) modulates the belowground translocation pathway of plant-fixed carbon. Shifts in active AMF species under elevated atmospheric CO(2) conditions are coupled to changes within active rhizosphere bacterial and fungal communities. Thus, as opposed to simply increasing the activity of soil-borne microbes through enhanced rhizodeposition, elevated atmospheric CO(2) clearly evokes the emergence of distinct opportunistic plant-associated microbial communities. Analyses involving RNA-based stable isotope probing, neutral/phosphate lipid fatty acids stable isotope probing, community fingerprinting, and real-time PCR allowed us to trace plant-fixed carbon to the affected soil-borne microorganisms. Based on our data, we present a conceptual model in which plant-assimilated carbon is rapidly transferred to AMF, followed by a slower release from AMF to the bacterial and fungal populations well-adapted to the prevailing (myco-)rhizosphere conditions. This model provides a general framework for reappraising carbon-flow paths in soils, facilitating predictions of future interactions between rising atmospheric CO(2) concentrations and terrestrial ecosystems.
Department of Microbial Ecology, The Netherlands Institute of Ecology NIOO-KNAW, 6666 ZG Heteren, The Netherlands.
Barbara
B
Drigo
Agata S
AS
Pijl
Henk
H
Duyts
Anna M
AM
Kielak
Hannes A
HA
Gamper
Marco J
MJ
Houtekamer
Henricus T S
HT
Boschker
Paul L E
PL
Bodelier
Andrew S
AS
Whiteley
Johannes A
JA
van Veen
George A
GA
Kowalchuk
D001272:Atmosphere / Q000737:chemistry; D001419:Bacteria / Q000235:genetics / Q000378:metabolism; D002244:Carbon / Q000378:metabolism*; D002245:Carbon Dioxide / Q000378:metabolism*; D002247:Carbon Isotopes / Q000378:metabolism; D031255:Carex Plant / Q000378:metabolism / Q000382:microbiology; D057231:Climate Change; D017753:Ecosystem; D031751:Festuca / Q000378:metabolism / Q000382:microbiology; D005658:Fungi / Q000235:genetics / Q000378:metabolism; D008954:Models, Biological; D008969:Molecular Sequence Data; D038821:Mycorrhizae / Q000378:metabolism; D018517:Plant Roots / Q000378:metabolism* / Q000382:microbiology*; D012329:RNA, Bacterial / Q000235:genetics; D012331:RNA, Fungal / Q000235:genetics; D012987:Soil / Q000032:analysis; D012988:Soil Microbiology
D002247:Carbon Isotopes; D012329:RNA, Bacterial; D012331:RNA, Fungal; D012987:Soil; D002245:Carbon Dioxide; D002244:Carbon