FishMap Zv8 update--a genomic regulatory map of zebrafish.
The advancements in genomics technologies and the amenability to large-scale computational analysis have contributed immensely to the understanding of the zebrafish genome, its organization, and its functional correlates. Translating genomics information into biological meaning would require integration and amenability of data and tools. FishMap is a community resource for genomic datasets on zebrafish created with a vision to provide relevant and readily available information to zebrafish researchers. The present update of FishMap has kept up with the availability of the latest zebrafish genome assembly (Zv8). In this update, particular emphasis has been given to noncoding RNAs and noncoding RNA-mediated regulation in addition to genomic regulatory motifs, which are emerging areas of vertebrate biology. FishMap Zv8 update also features a sequence mapping and analysis server. Consistent with its commitment to make the information freely available to the community, FishMap features options to share data between compatible resources in addition to making it amenable to programmatic access. FishMap Zv8 update is available at http://fishmap2.igib.res.in.
Institute of Genomics and Integrative Biology (Council of Scientific and Industrial Research), Delhi, India.
Deeksha
D
Bhartiya
Jayant
J
Maini
Meenakshi
M
Sharma
Prateek
P
Joshi
Saurabh V
SV
Laddha
Saakshi
S
Jalali
Ashok
A
Patowary
Ramya
R
Purkanti
Mukesh
M
Lalwani
Angom Ramcharan
AR
Singh
Rajendra
R
Chauhan
Naresh
N
Singh
Anshu
A
Bhardwaj
Vinod
V
Scaria
Sridhar
S
Sivasubbu
D000818:Animals; D019295:Computational Biology / Q000379:methods*; D030541:Databases, Genetic; D053263:Gene Regulatory Networks / Q000235:genetics*; D023281:Genomics / Q000379:methods*; D020407:Internet; D012984:Software; D015027:Zebrafish / Q000235:genetics*