Near full-length sequence of HIV type 1 subtype J strain 04CMU11421 from Cameroon.
Although Cameroon, in west central Africa, has a relatively low HIV prevalence of 5-6%, all HIV-1 groups (M, N, O, and P), nearly all HIV-1 group M subtypes, and numerous intersubtype recombinant forms have been identified in Cameroon. In this report, we describe the near full-length sequence of 04CMU11421, an HIV-1 group M subtype J strain collected in Cameroon in 2004. Phylogenetic analysis of the genome sequence shows high bootstrap support with three subtype J reference sequences in the HIV Sequence database. Therefore, 04CMU11421 represents a fourth pure subtype J isolate and the first reported in Cameroon.
Yamaguchi
Julie
J
Abbott Diagnostics, Abbott Park, Illinois, USA.
Vallari
Ana
A
Ngansop
Charlotte
C
Makamche
Florence
F
Ndembi
Nicaise
N
Mbanya
Dora
D
Kaptué
Lazare
L
Gürtler
Lutz G
LG
Devare
Sushil G
SG
Brennan
Catherine A
CA
D002163:Cameroon; D016000:Cluster Analysis; D005838:Genotype; D015658:HIV Infections / Q000821:virology*; D015497:HIV-1 / Q000145:classification* / Q000235:genetics* / Q000302:isolation & purification; D006801:Humans; D008969:Molecular Sequence Data; D010802:Phylogeny; D012367:RNA, Viral / Q000235:genetics*; D017422:Sequence Analysis, DNA; D017385:Sequence Homology
D012367:RNA, Viral