title: Laser microdissection of conifer stem tissues: isolation and analysis of high quality RNA, terpene synthase enzyme activity and terpenoid metabolites from resin ducts and cambial zone tissue of white spruce (Picea glauca).
abstract: BACKGROUND
  Laser microdissection (LMD) has been established for isolation of individual tissue types from herbaceous plants. However, there are few reports of cell- and tissue-specific analysis in woody perennials. While microdissected tissues are commonly analyzed for gene expression, reports of protein, enzyme activity and metabolite analysis are limited due in part to an inability to amplify these molecules. Conifer stem tissues are organized in regular patterns with xylem, phloem and cortex development controlled by the activity of the cambial zone (CZ). Defense responses of conifer stems against insects and pathogens involve increased accumulation of terpenoids in cortical resin ducts (CRDs) and de novo formation of traumatic resin ducts from CZ initials. These tissues are difficult to isolate for tissue-specific molecular and biochemical characterization and are thus good targets for application of LMD.
  
  
  RESULTS
  We describe robust methods for isolation of individual tissue-types from white spruce (Picea glauca) stems for analysis of RNA, enzyme activity and metabolites. A tangential cryosectioning approach was important for obtaining large quantities of CRD and CZ tissues using LMD. We report differential expression of genes involved in terpenoid metabolism between CRD and CZ tissues and in response to methyl jasmonate (MeJA). Transcript levels of beta-pinene synthase and levopimaradiene/abietadiene synthase were constitutively higher in CRDs, but induction was stronger in CZ in response to MeJA. 3-Carene synthase was more strongly induced in CRDs compared to CZ. A differential induction pattern was observed for 1-deoxyxyulose-5-phosphate synthase, which was up-regulated in CRDs and down-regulated in CZ. We identified terpene synthase enzyme activity in CZ protein extracts and terpenoid metabolites in both CRD and CZ tissues.
  
  
  CONCLUSIONS
  Methods are described that allow for analysis of RNA, enzyme activity and terpenoid metabolites in individual tissues isolated by LMD from woody conifer stems. Patterns of gene expression are demonstrated in specific tissues that may be masked in analysis of heterogeneous samples. Combined analysis of transcripts, proteins and metabolites of individual tissues will facilitate future characterization of complex processes of woody plant development, including periodic stem growth and dormancy, cell specialization, and defense and may be applied widely to other plant species.
authors.affiliation: Michael Smith Laboratories, University of British Columbia, 2185 East Mall, Vancouver, BC, V6T 1Z4, Canada.
authors.forename: Eric
authors.initials: E
authors.lastname: Abbott
authors.forename: Dawn
authors.initials: D
authors.lastname: Hall
authors.forename: Björn
authors.initials: B
authors.lastname: Hamberger
authors.forename: Jörg
authors.initials: J
authors.lastname: Bohlmann
mesh_terms: D000085:Acetates / Q000494:pharmacology; D019883:Alkyl and Aryl Transferases / Q000302:isolation & purification / Q000378:metabolism*; D003517:Cyclopentanes / Q000494:pharmacology; D007834:Lasers; D042282:Microdissection / Q000379:methods; D054883:Oxylipins / Q000494:pharmacology; D028222:Picea / Q000737:chemistry* / Q000201:enzymology* / Q000235:genetics; D010940:Plant Proteins / Q000302:isolation & purification / Q000378:metabolism; D018547:Plant Stems / Q000737:chemistry / Q000201:enzymology / Q000235:genetics; D018749:RNA, Plant / Q000032:analysis* / Q000302:isolation & purification; D020133:Reverse Transcriptase Polymerase Chain Reaction; D013729:Terpenes / Q000737:chemistry* / Q000302:isolation & purification
chemical_list: D000085:Acetates; D003517:Cyclopentanes; D054883:Oxylipins; D010940:Plant Proteins; D018749:RNA, Plant; D013729:Terpenes; C072239:methyl jasmonate; D019883:Alkyl and Aryl Transferases; C108877:terpene synthase