title: Detection of DNA Sequence with Enhanced Sensitivity and Higher FRET Efficiency Using a Light-Emitting Polymer, Peptide Nucleic Acid Probe and Anionic Surfactant System.
abstract: An improved strategy has been developed for detection of DNA sequence by using water-soluble cationic conjugated polymer (PFP)/single-strand (ss) DNA and peptide nucleic acid labeled with fluorescent dye (PNAC*), where an anionic surfactant (sodium dodecyl sulphate, SDS) system has been used to improve the sensitivity of the sensor. The method of detection is simple to use, fast and cost-effective. This method uses the phenomenon of Forester Resonance Energy Transfer (FRET). The detection sensitivity of the biosensor has been improved by about ten times by using the anionic surfactant. It is observed that the effect of surfactant is to increase the photoluminescence (PL) intensity of the PNAC* when the sequence of the DNA is complementary (to that of PNA probe). On the other hand when the two sequences are non-complementary, the PL intensity of the PNAC* is further reduced as compared to the case when surfactant was absent.
authors.affiliation: a Materials Laboratory, Department of Electronic Science, University of Delhi South Campus, Benito Juarez Road, New Delhi-110021, India.
authors.forename: Nidhi
authors.initials: N
authors.lastname: Mathur
authors.forename: Anamika
authors.initials: A
authors.lastname: Aneja
authors.forename: P K
authors.initials: PK
authors.lastname: Bhatnagar
authors.forename: P C
authors.initials: PC
authors.lastname: Mathur
mesh_terms: D015374:Biosensing Techniques / Q000295:instrumentation / Q000379:methods*; D004277:DNA, Single-Stranded / Q000737:chemistry; D031541:Fluorescence Resonance Energy Transfer / Q000295:instrumentation / Q000379:methods*; D005456:Fluorescent Dyes / Q000737:chemistry; D020135:Peptide Nucleic Acids / Q000737:chemistry; D011108:Polymers / Q000737:chemistry; D017422:Sequence Analysis, DNA / Q000295:instrumentation / Q000379:methods*; D013501:Surface-Active Agents / Q000737:chemistry; D014867:Water / Q000737:chemistry
chemical_list: D004277:DNA, Single-Stranded; D005456:Fluorescent Dyes; D020135:Peptide Nucleic Acids; D011108:Polymers; D013501:Surface-Active Agents; D014867:Water