[Polymorphism of MHC-DPB1 gene exon 2 in rhesus macaques (Macaca mulatta)].
Rhesus macaque (Macaca mulatta) has long been used as an experimental model animal for biomedical research and was under the key state protection (class II) from Chinese government. In order to facilitate the use of Chinese rhesus macaques in biomedical research and their protection based on better understanding of the major mistocompability complex (MHC) genes in these macaques, the exon 2 of Mamu-DPB1 genes were determined in 106 wild rhesus macaques using DGGE, cloning and sequencing. A total of 21 Mamu-DPB1 alleles were obtained, of which 15 alleles were novel sequences that had not been documented previously. Mamu-DPB1 30 was the most frequent allele in the whole large population comprising all 106 rhesus macaque individuals (0.1120) and in Xiaojin population (0.1120), Mamu-DPB1 04 in Heishui (0.1702), -DPB1 32 in Bazhong (0.1613), -DPB1 30 in Hanyuan (0.1120), and -DPB1 04 in Jiulong (0.1139). The alignment of the amino acids sequences showed that 12 variable sites were species-specific, of which 9 sites occurred in the putative amino acids sequences of the 15 novel Mamu-DPB1 alleles. Trans-species polymorphism was observed on the phylogenetic tree based on the DPB1 alleles of rhesus macaques and cynomolgus (Macaca fascicularis). In addition, these results also demonstrated that significant genetic differentiation has occurred between Chinese and Indian rhesus macaque population.
Xu
Huai-Liang
HL
Key Laboratory of Animal Disease and Human Health of Sichuan Province, Sichuan Agricultural University, Ya'an 625014, China. huailxu@yahoo.com
Wang
Yan-Ting
YT
Cheng
An-Chun
AC
Yao
Yong-Fang
YF
Ni
Qing-Yong
QY
Zeng
Wen
W
Bi
Feng-Jun
FJ
Yang
Ze-Xia
ZX
Chen
Xiao-Yue
XY
D000595:Amino Acid Sequence; D000818:Animals; D005091:Exons; D005787:Gene Frequency; D006682:HLA-DP Antigens / Q000737:chemistry / Q000235:genetics*; D059868:HLA-DP beta-Chains; D008252:Macaca fascicularis / Q000235:genetics; D008253:Macaca mulatta / Q000235:genetics*; D008969:Molecular Sequence Data; D010802:Phylogeny; D011110:Polymorphism, Genetic
D006682:HLA-DP Antigens; D059868:HLA-DP beta-Chains; C071170:HLA-DPB1 antigen