title: Excitation transfer connectivity in different purple bacteria: a theoretical and experimental study.
abstract: Photosynthetic membranes accommodate densely packed light-harvesting complexes which absorb light and convey excitation to the reaction center (RC). The relationship between the fluorescence yield (phi) and the fraction (x) of closed RCs is informative about the probability for an excitation reaching a closed RC to be redirected to another RC. In this work, we have examined in this respect membranes from various bacteria and searched for a correlation with the arrangement of the light-harvesting complexes as known from atomic force or electron microscopies. A first part of the paper is devoted to a theoretical study analyzing the phi(x) relationship in various models: monomeric or dimeric RC-LH1 core complexes, with or without the peripheral LH2 complexes. We show that the simple "homogeneous" kinetic treatment used here agrees well with more detailed master equation calculations. We also discuss the agreement between information derived from the present technique and from singlet annihilation experiments. The experimental results show that the enhancement of the cross section of open RCs due to excitation transfer from closed units varies from 1.5 to 3 depending on species. The ratio of the core to core transfer rate (including the indirect pathway via LH2) to the rate of trapping in open units is in the range of 0.5 to 4. It is about 1 in Rhodobacter sphaeroides and does not increase significantly in mutants lacking LH2-despite the more numerous contacts between the dimeric core complexes expected in this case. The connectivity in this bacterium is due in good part to the fast transfer between the two partners of the dimeric (RC-LH1-PufX)(2) complex. The connectivity is however increased in the carotenoidless and LH2-less strain R26, which we ascribe to an anomalous LH1. A relatively high connectivity was found in Rhodospirillum photometricum, although not as high as predicted in the calculations of Fassioli et al. (2010). This illustrates a more general discrepancy between the measured efficiency of core to core excitation transfer and theoretical estimates. We argue that the limited core to core connectivity found in purple bacteria may reflect a trade-off between light-harvesting efficiency and the hindrance to quinone diffusion that would result from too tightly packed LH complexes.
authors.affiliation: Laboratoire de Bioénergétique Cellulaire (CEA/DSV/IBEB; UMR 6191 CNRS/CEA) Aix-Marseille Université, Saint-Paul-lez-Durance, France.
authors.forename: Matthieu
authors.initials: M
authors.lastname: de Rivoyre
authors.forename: Nicolas
authors.initials: N
authors.lastname: Ginet
authors.forename: Pierre
authors.initials: P
authors.lastname: Bouyer
authors.forename: Jérôme
authors.initials: J
authors.lastname: Lavergne
mesh_terms: D002462:Cell Membrane / Q000378:metabolism; D004058:Diffusion; D007700:Kinetics; D008027:Light; D045342:Light-Harvesting Protein Complexes / Q000378:metabolism*; D008962:Models, Theoretical; D010788:Photosynthesis; D020560:Proteobacteria / Q000737:chemistry* / Q000235:genetics / Q000378:metabolism*; D011809:Quinones / Q000378:metabolism
chemical_list: D045342:Light-Harvesting Protein Complexes; D011809:Quinones