ATDB 2.0: A database integrated toxin-ion channel interaction data.
We have developed an updated version of the Animal Toxin Database (ATDB 2.0) that provides a new bioinformatics resource for analyzing toxin-channel (T-C) interactions. Data on more than 54,000 T-C interactions, including 9193 high-confidence interactions, has been extracted, formatted and mapped to toxin and ion channel databases. The interaction data can be accessed easily through a new network browser on the website at http://protchem.hunnu.edu.cn/toxin. This resource may be useful for sequence pattern recognition and prediction of the function of new toxins.
He
Quanze
Q
The Key Laboratory of Protein Chemistry and Developmental Biology of Ministry of Education, College of Life Sciences, Hunan Normal University, Changsha 410081, PR China.
Han
Wenjun
W
He
Quanyuan
Q
Huo
Linju
L
Zhang
Jingjing
J
Lin
Yong
Y
Chen
Ping
P
Liang
Songping
S
D019295:Computational Biology; D016208:Databases, Factual; D007473:Ion Channels / Q000737:chemistry*; D017434:Protein Structure, Tertiary; D020539:Sequence Analysis, Protein; D014118:Toxins, Biological / Q000737:chemistry*; D014584:User-Computer Interface
D007473:Ion Channels; D014118:Toxins, Biological