Properties of knotted ring polymers. II. Transport properties.
We have calculated the hydrodynamic radius R(h) and intrinsic viscosity [eta] of both lattice self-avoiding rings and lattice theta-state rings that are confined to specific knot states by our path-integration technique. We observe that naive scaling arguments based on the equilibrium polymer size fail for both the hydrodynamic radius and the intrinsic viscosity, at least over accessible chain lengths. (However, we do conjecture that scaling laws will nevertheless prevail at sufficiently large N.) This failure is attributed to a "double" cross-over. One cross-over effect is the transition from delocalized to localized knotting: in short chains, the knot is distributed throughout the chain, while in long chains it becomes localized in only a portion of the chain. This transition occurs slowly with increasing N. The other cross-over, superimposed upon the first, is the so-called "draining" effect, in which transport properties maintain dependence on local structure out to very large N. The hydrodynamic mobility of knotted rings of the same length and backbone structure is correlated with the average crossing number X of the knots. The same correlation between mobility and knot complexity X has been observed for the gel-electrophoretic mobility of cyclic DNA molecules.
Mansfield
Marc L
ML
Department of Chemistry, Chemical Biology, and Biomedical Engineering, Stevens Institute of Technology, Hoboken, New Jersey 07030, USA. marc.mansfield@stevens.edu
Douglas
Jack F
JF
D000465:Algorithms; D003198:Computer Simulation; D004247:DNA / Q000737:chemistry*; D024202:Electrophoretic Mobility Shift Assay; D008956:Models, Chemical; D018583:Pliability; D011108:Polymers / Q000737:chemistry*; D013499:Surface Properties; D014783:Viscosity
D011108:Polymers; D004247:DNA