title: Entrapment neuropathy results in different microRNA expression patterns from denervation injury in rats.
abstract: BACKGROUND
  To compare the microRNA (miRNA) expression profiles in neurons and innervated muscles after sciatic nerve entrapment using a non-constrictive silastic tube, subsequent surgical decompression, and denervation injury.
  
  
  METHODS
  The experimental L4-L6 spinal segments, dorsal root ganglia (DRGs), and soleus muscles from each experimental group (sham control, denervation, entrapment, and decompression) were analyzed using an Agilent rat miRNA array to detect dysregulated miRNAs. In addition, muscle-specific miRNAs (miR-1, -133a, and -206) and selectively upregulated miRNAs were subsequently quantified using real-time reverse transcription-polymerase chain reaction (real-time RT-PCR).
  
  
  RESULTS
  In the soleus muscles, 37 of the 47 miRNAs (13.4% of the 350 unique miRNAs tested) that were significantly downregulated after 6 months of entrapment neuropathy were also among the 40 miRNAs (11.4% of the 350 unique miRNAs tested) that were downregulated after 3 months of decompression. No miRNA was upregulated in both groups. In contrast, only 3 miRNAs were upregulated and 3 miRNAs were downregulated in the denervated muscle after 6 months. In the DRGs, 6 miRNAs in the entrapment group (miR-9, miR-320, miR-324-3p, miR-672, miR-466b, and miR-144) and 3 miRNAs in the decompression group (miR-9, miR-320, and miR-324-3p) were significantly downregulated. No miRNA was upregulated in both groups. We detected 1 downregulated miRNA (miR-144) and 1 upregulated miRNA (miR-21) after sciatic nerve denervation. We were able to separate the muscle or DRG samples into denervation or entrapment neuropathy by performing unsupervised hierarchal clustering analysis. Regarding the muscle-specific miRNAs, real-time RT-PCR analysis revealed an approximately 50% decrease in miR-1 and miR-133a expression levels at 3 and 6 months after entrapment, whereas miR-1 and miR-133a levels were unchanged and were decreased after decompression at 1 and 3 months. In contrast, there were no statistical differences in the expression of miR-206 during nerve entrapment and after decompression. The expression of muscle-specific miRNAs in entrapment neuropathy is different from our previous observations in sciatic nerve denervation injury.
  
  
  CONCLUSIONS
  This study revealed the different involvement of miRNAs in neurons and innervated muscles after entrapment neuropathy and denervation injury, and implied that epigenetic regulation is different in these two conditions.
authors: Department of Neurosurgery, Chang Gung Memorial Hospital - Kaohsiung Medical Center, Chang Gung University College of Medicine, Taiwan.
authors: Cheng-Shyuan
authors: CS
authors: Rau
authors: Jonathan Chris
authors: JC
authors: Jeng
authors: Seng-Feng
authors: SF
authors: Jeng
authors: Tsu-Hsiang
authors: TH
authors: Lu
authors: Yi-Chun
authors: YC
authors: Chen
authors: Po-Chou
authors: PC
authors: Liliang
authors: Chia-Jung
authors: CJ
authors: Wu
authors: Chia-Jung
authors: CJ
authors: Lin
authors: Ching-Hua
authors: CH
authors: Hsieh
mesh_terms: D000818:Animals; D003714:Denervation; D004195:Disease Models, Animal; D015536:Down-Regulation / Q000235:genetics; D005727:Ganglia, Spinal / Q000378:metabolism / Q000503:physiopathology; D005786:Gene Expression Regulation / Q000235:genetics*; D008297:Male; D035683:MicroRNAs / Q000037:antagonists & inhibitors / Q000096:biosynthesis*; D018482:Muscle, Skeletal / Q000294:innervation / Q000378:metabolism / Q000503:physiopathology; D009408:Nerve Compression Syndromes / Q000235:genetics* / Q000378:metabolism / Q000503:physiopathology; D009474:Neurons / Q000378:metabolism / Q000473:pathology; D010523:Peripheral Nervous System Diseases / Q000235:genetics* / Q000378:metabolism / Q000503:physiopathology; D051381:Rats; D017207:Rats, Sprague-Dawley; D020426:Sciatic Neuropathy / Q000235:genetics* / Q000378:metabolism / Q000503:physiopathology; D013116:Spinal Cord / Q000378:metabolism / Q000503:physiopathology
chemical_list: C549446:MIRN133 microRNA, rat; D035683:MicroRNAs; C522220:mirn206 microRNA, rat