title: Effect of association with sulfate on the electrophoretic mobility of polyarginine and polylysine.
abstract: Domains rich in cationic amino acids are ubiquitous in peptides with the ability to cross cell membranes, which is likely related to the binding of such polypeptides to anionic groups on the membrane surface. To shed more light on these interactions, we investigated specific interactions between basic amino acids and oligopeptides thereof and anions by means of electrophoretic experiments and molecular dynamics simulations. To this end, we measured the electrophoretic mobilities of arginine, lysine, tetraarginine, and tetralysine in sodium chloride and sodium sulfate electrolytes as a function of ionic strength. The mobility was found to be consistently lower in sodium sulfate than in sodium chloride at the same ionic strength. The decrease in mobility in sodium sulfate was greater for tetraarginine than for tetralysine and was larger for tetrapeptides compared to the corresponding free amino acids. On the basis of molecular dynamics simulations and Bjerrum theory, we rationalize these results in terms of enhanced association between the amino acid side chains and sulfate. Simulations also predict a greater affinity of sulfate to the guanidinium side chain groups of arginine than to the ammonium groups of lysine, as the planar guanidinium geometry allows simultaneous strong hydrogen bonding to two sulfate oxygens. We show that the sulfate binding to arginine, but not to lysine, is cooperative. These results are consistent with the greater decrease in the mobility of arginine compared to that of lysine upon addition of sulfate salt. The nonspecific mobility retardation by sulfate is ascribed to its electrostatic interaction with the cationic amino acid side chain groups.
authors: Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, and Center for Biomolecules and Complex Molecular Systems, Flemingovo nám. 2, 16610 Prague 6, Czech Republic.
authors: Erik
authors: E
authors: Wernersson
authors: Jan
authors: J
authors: Heyda
authors: Anna
authors: A
authors: Kubícková
authors: Tomás
authors: T
authors: Krízek
authors: Pavel
authors: P
authors: Coufal
authors: Pavel
authors: P
authors: Jungwirth
mesh_terms: D004586:Electrophoresis / Q000379:methods*; D019791:Guanidine / Q000737:chemistry; D007477:Ions / Q000737:chemistry*; D008958:Models, Molecular; D056004:Molecular Dynamics Simulation; D009994:Osmolar Concentration; D010455:Peptides / Q000737:chemistry* / Q000235:genetics; D011107:Polylysine / Q000737:chemistry*; D012965:Sodium Chloride / Q000737:chemistry; D013431:Sulfates / Q000737:chemistry*
chemical_list: D007477:Ions; D010455:Peptides; D013431:Sulfates; C012036:sodium sulfate; D011107:Polylysine; C015462:polyarginine; D012965:Sodium Chloride; D019791:Guanidine