Genevar: a database and Java application for the analysis and visualization of SNP-gene associations in eQTL studies.
Genevar (GENe Expression VARiation) is a database and Java tool designed to integrate multiple datasets, and provides analysis and visualization of associations between sequence variation and gene expression. Genevar allows researchers to investigate expression quantitative trait loci (eQTL) associations within a gene locus of interest in real time. The database and application can be installed on a standard computer in database mode and, in addition, on a server to share discoveries among affiliations or the broader community over the Internet via web services protocols.


BACKGROUND
http://www.sanger.ac.uk/resources/software/genevar.
Yang
Tsun-Po
TP
Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1HH, UK.
Beazley
Claude
C
Montgomery
Stephen B
SB
Dimas
Antigone S
AS
Gutierrez-Arcelus
Maria
M
Stranger
Barbara E
BE
Deloukas
Panos
P
Dermitzakis
Emmanouil T
ET
D016208:Databases, Factual; D020869:Gene Expression Profiling / Q000379:methods; D023281:Genomics / Q000379:methods*; D020407:Internet; D020641:Polymorphism, Single Nucleotide; D040641:Quantitative Trait Loci / Q000235:genetics*; D012984:Software; D014584:User-Computer Interface