title: QuantProReloaded: quantitative analysis of microspot immunoassays.
abstract: Protein microarrays are well-established as sensitive tools for proteomics. Particularly, the microspot immunoassay (MIA) platform enables a quantitative analysis of (phospho-) proteins in complex solutions (e.g. cell lysates or blood plasma) and with low consumption of samples and reagents. Despite numerous biological and clinical applications of MIAs there is currently no user-friendly open source data analysis software available with versatile options for data analysis and data visualization. Here, we introduce the open source software QuantProReloaded that is specifically designed for the analysis of data from MIA experiments.
  
  
  METHODS
  QuantProReloaded is written in R and Java and is open for download under the BSB license at http://code.google.com/p/quantproreloaded/.
authors: Division of Molecular Genome Analysis, German Cancer Research Center, Heidelberg, Germany. a.joecker@dkfz.de
authors: Anika
authors: A
authors: Jöcker
authors: Johanna
authors: J
authors: Sonntag
authors: Frauke
authors: F
authors: Henjes
authors: Frank
authors: F
authors: Götschel
authors: Achim
authors: A
authors: Tresch
authors: Tim
authors: T
authors: Beissbarth
authors: Stefan
authors: S
authors: Wiemann
authors: Ulrike
authors: U
authors: Korf
mesh_terms: D007118:Immunoassay / Q000379:methods*; D040081:Protein Array Analysis / Q000379:methods*; D020543:Proteome / Q000032:analysis; D040901:Proteomics / Q000379:methods*; D012984:Software; D014584:User-Computer Interface
chemical_list: D020543:Proteome