title: Emergence of self-reproduction in cooperative chemical evolution of prebiological molecules.
abstract: The paper presents a model of coevolution of short peptides (P) and short oligonucleotides (N) at an early stage of chemical evolution leading to the origin of life. The model describes polymerization of both P and N types of molecules on mineral surfaces in aqueous solution at moderate temperatures. It is assumed that amino acid and nucleotide monomers were available in a prebiotic milieu, that periodic variation in environmental conditions between dry/warm and wet/cool took place and that energy sources were available for the polymerization. An artificial chemistry approach in combination with agent-based modeling was used to explore chemical evolution from an initially random mixture of monomers. It was assumed that the oligonucleotides could serve as templates for self-replication and for translation of peptide compositional sequences, and that certain peptides could serve as weak catalysts. Important features of the model are the short lengths of the peptide and oligonucleotide molecules that prevent an error catastrophe caused by copying errors and a finite diffusion rate of the molecules on a mineral surface that prevents excessive development of parasitism. The result of the simulation was the emergence of self-replicating molecular systems consisting of peptide catalysts and oligonucleotide templates. In addition, a smaller but significant number of molecules with alternative compositions also survived due to imprecise reproduction and translation of templates providing variability for further evolution. In a more general context, the model describes not only peptide-oligonucleotide molecular systems, but any molecular system containing two types of polymer molecules: one of which serves as templates and the other as catalysts.The presented coevolutionary system suggests a possible direction towards finding the origin of molecular functionality in a prebiotic environment.
authors.affiliation: Evolving Systems Technology, 95 Hawkfield Crescent, Calgary, Alberta, Canada. mfishkis@telus.net
authors.forename: Maya
authors.initials: M
authors.lastname: Fishkis
mesh_terms: D000596:Amino Acids / Q000737:chemistry*; D002384:Catalysis; D004058:Diffusion; D019418:Evolution, Chemical; D006868:Hydrolysis; D008956:Models, Chemical; D009841:Oligonucleotides / Q000378:metabolism; D000069497:Origin of Life; D010455:Peptides / Q000378:metabolism; D058105:Polymerization; D013698:Templates, Genetic
chemical_list: D000596:Amino Acids; D009841:Oligonucleotides; D010455:Peptides
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