title: Anammox bacterial diversity in various aquatic ecosystems based on the detection of hydrazine oxidase genes (hzoA/hzoB).
abstract: Anammox bacteria belonging to the phylum Planctomycetes are responsible for N removal through NH(4)(+) oxidation coupled with NO(2)(-) reduction. Microbial diversity and ecology of anammox bacteria have not yet been fully revealed due to limitations of 16S rRNA analysis. The hydrazine oxidase gene in cluster 1 (hereafter hzoA/hzoB) was suggested as a proper genetic marker due to its high expression and ubiquitous presence in anammox bacteria. We conducted a comparative analysis of 16S rRNA and hzoA/hzoB genes to reveal anammox bacterial diversity and distribution in various aquatic environments. Phylogenetic analyses of 16S rRNA and hzoA/hzoB genes showed the dominance of Scalindua organisms in marine ecosystems, but there was no congruence of 16S rRNA and hzoA/hzoB gene phylogenies among the freshwater anammox bacteria associated with Brocadia sp., Jettenia sp., and Anammoxoglobus sp. Higher diversity of anammox bacteria was revealed based on hzoA/hzoB genes than 16S rRNA genes in the examined environments. Multiple regression analysis showed that salinity had significant influence on differential distribution and diversity of anammox bacteria in different ecosystems. Thus, molecular detection and resulting phylogeny of the hzoA/hzoB gene generated a better understanding of anammox bacterial diversity and their ecological distribution in various aquatic ecosystems.
authors.affiliation: Center for Marine Science, University of North Carolina Wilmington, Wilmington, NC 28409, USA.
authors.forename: Matthew D
authors.initials: MD
authors.lastname: Hirsch
authors.forename: Zachery T
authors.initials: ZT
authors.lastname: Long
authors.forename: Bongkeun
authors.initials: B
authors.lastname: Song
mesh_terms: D001419:Bacteria / Q000145:classification / Q000201:enzymology / Q000235:genetics*; D044822:Biodiversity; D003001:Cloning, Molecular; D004269:DNA, Bacterial / Q000235:genetics; D005798:Genes, Bacterial; D006834:Hydrazines / Q000378:metabolism*; D009584:Nitrogen / Q000378:metabolism; D010088:Oxidoreductases / Q000235:genetics* / Q000378:metabolism; D010802:Phylogeny; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D012044:Regression Analysis; D017422:Sequence Analysis, DNA; D014871:Water Microbiology
chemical_list: D004269:DNA, Bacterial; D006834:Hydrazines; D012336:RNA, Ribosomal, 16S; D010088:Oxidoreductases; D009584:Nitrogen