Short circuiting a sulfite oxidising enzyme with direct electrochemistry: active site substitutions and their effect on catalysis and electron transfer.
Sulfite dehydrogenase (SDH) from Starkeya novella is a heterodimeric enzyme comprising a Mo active site and a heme c electron relay, which mediates electron transfer from the Mo cofactor to cytochrome c following sulfite oxidation. Studies on the wild type enzyme (SDH(WT)) and its variants have identified key amino acids at the active site, specifically Arg-55 and His-57. We report the Mo(VI/V), Mo(V/IV) and Fe(III/II) (heme) redox potentials of the variants SDH(R55K), SDH(R55M), SDH(R55Q) and SDH(H57A) in comparison with those of SDH(WT). For SDH(R55M), SDH(R55Q) and SDH(H57A) the heme potentials are lowered from ca. 240mV in SDH(WT) to ca. 200mV, while the heme potential in SDH(R55K) remains unchanged and the Mo redox potentials are not affected significantly in any of these variants. Protein film voltammetry reveals a pH dependence of the electrochemical catalytic half-wave potential (E(cat)) of -59mV/pH in SDH(WT) and SDH(R55K) which tracks the pH dependence of the Mo(VI/V) redox potential. By contrast, the catalytic potentials for SDH(R55M) and SDH(H57A) are pH-independent and follow the potential of the heme cofactor. These results highlight a switch in the pathway of electron exchange as a function of applied potential that is revealed by protein film voltammetry where an actuation of rate limiting intramolecular electron transfer (IET, Mo to heme) at high potential attenuates the catalytic current relative to faster, direct electron transfer (Mo to electrode) at lower potential. The same change in electron transfer pathway is linked to an unusual peak-shaped profile of the ideally sigmoidal steady state voltammogram in SDH(WT) alone, which has been associated with a potential dependent change in the orientation of the enzyme on the electrode surface. All other variants show purely sigmoidal voltammetry due to their inherently slower turnover numbers which are always lower than IET rates.
Rapson
Trevor D
TD
Centre for Metals in Biology, School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, 4072, Australia.
Kappler
Ulrike
U
Hanson
Graeme R
GR
Bernhardt
Paul V
PV
D019943:Amino Acid Substitution; D001120:Arginine / Q000737:chemistry / Q000378:metabolism; D020134:Catalytic Domain; D018360:Crystallography, X-Ray; D004563:Electrochemistry / Q000379:methods; D004579:Electron Transport; D014644:Genetic Variation; D006418:Heme / Q000378:metabolism; D006639:Histidine / Q000737:chemistry / Q000378:metabolism; D006863:Hydrogen-Ion Concentration; D008958:Models, Molecular; D010084:Oxidation-Reduction; D011487:Protein Conformation; D050902:Sulfite Dehydrogenase / Q000737:chemistry* / Q000378:metabolism
D006418:Heme; D006639:Histidine; D001120:Arginine; D050902:Sulfite Dehydrogenase