title: A model of canopy photosynthesis incorporating protein distribution through the canopy and its acclimation to light, temperature and CO2.
abstract: OBJECTIVE
  The distribution of photosynthetic enzymes, or nitrogen, through the canopy affects canopy photosynthesis, as well as plant quality and nitrogen demand. Most canopy photosynthesis models assume an exponential distribution of nitrogen, or protein, through the canopy, although this is rarely consistent with experimental observation. Previous optimization schemes to derive the nitrogen distribution through the canopy generally focus on the distribution of a fixed amount of total nitrogen, which fails to account for the variation in both the actual quantity of nitrogen in response to environmental conditions and the interaction of photosynthesis and respiration at similar levels of complexity.
  
  
  METHODS
  A model of canopy photosynthesis is presented for C(3) and C(4) canopies that considers a balanced approach between photosynthesis and respiration as well as plant carbon partitioning. Protein distribution is related to irradiance in the canopy by a flexible equation for which the exponential distribution is a special case. The model is designed to be simple to parameterize for crop, pasture and ecosystem studies. The amount and distribution of protein that maximizes canopy net photosynthesis is calculated.
  
  
  RESULTS
  The optimum protein distribution is not exponential, but is quite linear near the top of the canopy, which is consistent with experimental observations. The overall concentration within the canopy is dependent on environmental conditions, including the distribution of direct and diffuse components of irradiance.
  
  
  CONCLUSIONS
  The widely used exponential distribution of nitrogen or protein through the canopy is generally inappropriate. The model derives the optimum distribution with characteristics that are consistent with observation, so overcoming limitations of using the exponential distribution. Although canopies may not always operate at an optimum, optimization analysis provides valuable insight into plant acclimation to environmental conditions. Protein distribution has implications for the prediction of carbon assimilation, plant quality and nitrogen demand.
authors.affiliation: IMJ Consultants, 127 Rose St, Fitzroy 3065, Melbourne, Victoria, Australia. ian@imj.com.au
authors.forename: Ian R
authors.initials: IR
authors.lastname: Johnson
authors.forename: John H M
authors.initials: JH
authors.lastname: Thornley
authors.forename: Jonathan M
authors.initials: JM
authors.lastname: Frantz
authors.forename: Bruce
authors.initials: B
authors.lastname: Bugbee
mesh_terms: D002245:Carbon Dioxide / Q000378:metabolism*; D008027:Light; D008954:Models, Biological; D008962:Models, Theoretical; D010788:Photosynthesis / Q000502:physiology*; D010940:Plant Proteins / Q000378:metabolism*; D013696:Temperature
chemical_list: D010940:Plant Proteins; D002245:Carbon Dioxide