title: BUCKy: gene tree/species tree reconciliation with Bayesian concordance analysis.
abstract: BACKGROUND
  BUCKy is a C++ program that implements Bayesian concordance analysis. The method uses a non-parametric clustering of genes with compatible trees, and reconstructs the primary concordance tree from clades supported by the largest proportions of genes. A population tree with branch lengths in coalescent units is estimated from quartet concordance factors.
  
  
  BACKGROUND
  BUCKy is open source and distributed under the GNU general public license at www.stat.wisc.edu/∼ane/bucky/.
authors.affiliation: Department of Statistics, University of Wisconsin-Madison, WI 53706, USA.
authors.forename: Bret R
authors.initials: BR
authors.lastname: Larget
authors.forename: Satish K
authors.initials: SK
authors.lastname: Kotha
authors.forename: Colin N
authors.initials: CN
authors.lastname: Dewey
authors.forename: Cécile
authors.initials: C
authors.lastname: Ané
mesh_terms: D001499:Bayes Theorem; D019295:Computational Biology / Q000379:methods*; D005796:Genes; D010802:Phylogeny; D012984:Software