title: PathJam: a new service for integrating biological pathway information.
abstract: Biological pathways are crucial to much of the scientific research today including the study of specific biological processes related with human diseases. PathJam is a new comprehensive and freely accessible web-server application integrating scattered human pathway annotation from several public sources. The tool has been designed for both (i) being intuitive for wet-lab users providing statistical enrichment analysis of pathway annotations and (ii) giving support to the development of new integrative pathway applications. PathJam&rsquo;s unique features and advantages include interactive graphs linking pathways and genes of interest, downloadable results in fully compatible formats, GSEA compatible output files and a standardized RESTful API.
authors.affiliation: Escuela Superior de Ingeniería Informática University of Vigo, Edificio Politécnico, Campus Universitario As Lagoas s/n, 32004 Ourense, Spain.
authors.forename: Daniel
authors.initials: D
authors.lastname: Glez-Peña
authors.forename: Miguel
authors.initials: M
authors.lastname: Reboiro-Jato
authors.forename: Rubén
authors.initials: R
authors.lastname: Domínguez
authors.forename: Gonzalo
authors.initials: G
authors.lastname: Gómez-López
authors.forename: David G
authors.initials: DG
authors.lastname: Pisano
authors.forename: Florentino
authors.initials: F
authors.lastname: Fdez-Riverola
mesh_terms: D019295:Computational Biology / Q000379:methods*; D003196:Computer Graphics; D003628:Database Management Systems; D030541:Databases, Genetic; D006801:Humans; D016247:Information Storage and Retrieval; D020407:Internet; D015233:Models, Statistical; D012984:Software; D049490:Systems Biology; D014584:User-Computer Interface