PathJam: a new service for integrating biological pathway information.
Biological pathways are crucial to much of the scientific research today including the study of specific biological processes related with human diseases. PathJam is a new comprehensive and freely accessible web-server application integrating scattered human pathway annotation from several public sources. The tool has been designed for both (i) being intuitive for wet-lab users providing statistical enrichment analysis of pathway annotations and (ii) giving support to the development of new integrative pathway applications. PathJam&rsquo;s unique features and advantages include interactive graphs linking pathways and genes of interest, downloadable results in fully compatible formats, GSEA compatible output files and a standardized RESTful API.
Glez-Peña
Daniel
D
Escuela Superior de Ingeniería Informática University of Vigo, Edificio Politécnico, Campus Universitario As Lagoas s/n, 32004 Ourense, Spain.
Reboiro-Jato
Miguel
M
Domínguez
Rubén
R
Gómez-López
Gonzalo
G
Pisano
David G
DG
Fdez-Riverola
Florentino
F
D019295:Computational Biology / Q000379:methods*; D003196:Computer Graphics; D003628:Database Management Systems; D030541:Databases, Genetic; D006801:Humans; D016247:Information Storage and Retrieval; D020407:Internet; D015233:Models, Statistical; D012984:Software; D049490:Systems Biology; D014584:User-Computer Interface