AHD2.0: an update version of Arabidopsis Hormone Database for plant systematic studies.
Phytohormone studies enlightened our knowledge of plant responses to various changes. To provide a systematic and comprehensive view of genes participating in plant hormonal regulation, an online accessible database Arabidopsis Hormone Database (AHD) has been developed, which is a collection of hormone related genes of the model organism Arabidopsis thaliana (AHRGs). Recently we updated our database from AHD to a new version AHD2.0 by adding several pronounced features: (i) updating our collection of AHRGs based on most recent publications as well as constructing elaborate schematic diagrams of each hormone biosynthesis and signaling pathways; (ii) adding orthologs of sequenced plants listed in OrthoMCL-DB to each AHRG in the updated database; (iii) providing predicted miRNA splicing site(s) for each AHRG; (iv) integrating genes that genetically interact with each AHRG according to literatures mining; (v) providing links to a powerful online analysis platform WebLab for the convenience of in-time bioinformatics analysis and (vi) providing links to widely used protein databases and integrating more expression profiling information that would facilitate users for a more systematic and integrative analysis related to phytohormone research.
National Laboratory of Protein Engineering and Plant Genetic Engineering, College of Life Sciences, Peking University, Beijing 100871, PR China.
Zhiqiang
Z
Jiang
Xiaochuan
X
Liu
Zhiyu
Z
Peng
Yinan
Y
Wan
Yusi
Y
Ji
Wenrong
W
He
Wen
W
Wan
Jingchu
J
Luo
Hongwei
H
Guo
D017360:Arabidopsis / Q000235:genetics* / Q000378:metabolism; D030541:Databases, Genetic; D017343:Genes, Plant; D035683:MicroRNAs / Q000378:metabolism; D010937:Plant Growth Regulators / Q000096:biosynthesis / Q000378:metabolism*; D012326:RNA Splicing
D035683:MicroRNAs; D010937:Plant Growth Regulators