Phenotypic characterization of Corynebacterium glutamicum under osmotic stress conditions using elementary mode analysis.
Corynebacterium glutamicum, a soil bacterium, is used to produce amino acids such as lysine and glutamate. C. glutamicum is often exposed to osmolality changes in its medium, and the bacterium has therefore evolved several adaptive response mechanisms to overcome them. In this study we quantify the metabolic response of C. glutamicum under osmotic stress using elementary mode analysis (EMA). Further, we obtain the optimal phenotypic space for the synthesis of lysine and formation of biomass. The analysis demonstrated that with increasing osmotic stress, the flux towards trehalose formation and energy-generating pathways increased, while the flux of anabolic reactions diminished. Nodal analysis indicated that glucose-6-phosphate, phosphoenol pyruvate, and pyruvate nodes were capable of adapting to osmotic stress, whereas the oxaloacetic acid node was relatively unresponsive. Fewer elementary modes were active under stress indicating the rigid behavior of the metabolism in response to high osmolality. Optimal phenotypic space analysis revealed that under normal conditions the organism optimized growth during the initial log phase and lysine and trehalose formation during the stationary phase. However, under osmotic stress, the analysis demonstrated that the organism operates under suboptimal conditions for growth, and lysine and trehalose formation.
Department of Biosciences and Bioengineering, Indian Institute of Technology, Bombay, Powai, Mumbai, 400076, India.
Meghna
M
Rajvanshi
K V
KV
Venkatesh
D018533:Biomass; D048230:Corynebacterium glutamicum / Q000254:growth & development / Q000378:metabolism*; D019298:Glucose-6-Phosphate / Q000378:metabolism; D008239:Lysine / Q000378:metabolism; D053858:Metabolic Networks and Pathways; D009994:Osmolar Concentration; D009997:Osmotic Pressure; D010641:Phenotype; D010728:Phosphoenolpyruvate / Q000378:metabolism; D019289:Pyruvic Acid / Q000378:metabolism; D014199:Trehalose / Q000378:metabolism
D019298:Glucose-6-Phosphate; D010728:Phosphoenolpyruvate; D019289:Pyruvic Acid; D014199:Trehalose; D008239:Lysine