Insights on the permeability of wide protein channels: measurement and interpretation of ion selectivity.
Ion channels are hollow proteins that have evolved to exhibit discrimination between charged solutes. This property, known as ion selectivity is critical for several biological functions. By using the bacterial porin OmpF as a model system of wide protein channels, we demonstrate that significant insights can be gained when selectivity measurements are combined with electrodiffusion continuum models and simulations based on the atomic structure. A correct interpretation of the mechanisms ruling the many sources of channel discrimination is a first, indispensable step for the understanding of the controlled movement of ions into or out of cells characteristic of many physiological processes. We conclude that the scattered information gathered from several independent approaches should be appropriately merged to provide a unified and coherent picture of the channel selectivity.
Dept. Physics, Lab. Molecular Biophysics, Universitat Jaume I, 12080 Castellón, Spain. aguilell@uji.es
Vicente M
VM
Aguilella
María
M
Queralt-Martín
Marcel
M
Aguilella-Arzo
Antonio
A
Alcaraz
D055724:Electrophysiological Phenomena; D007473:Ion Channels / Q000737:chemistry* / Q000378:metabolism*; D017136:Ion Transport; D056004:Molecular Dynamics Simulation; D010539:Permeability; D018272:Porins / Q000737:chemistry / Q000502:physiology; D013379:Substrate Specificity
D007473:Ion Channels; C109237:OmpF protein; D018272:Porins