title: Agricultural recovery of a formerly radioactive area: I. Establishment of high-resolution quantitative protein map of mature flax seeds harvested from the remediated Chernobyl area.
abstract: In recent years there has been an increasing tendency toward remediation of contaminated areas for agriculture purposes. The study described herein is part of a comprehensive, long-term characterization of crop plants grown in the area formerly contaminated with radioactivity. As a first step, we have established a quantitative map of proteins isolated from mature flax (Linum usitatissimum L.) seeds harvested from plants grown in a remediated plot localized directly in Chernobyl town. Flax was selected because it is a crop of economic and historical importance, despite the relative paucity of molecular resources. We used 2-dimensional electrophoresis followed by tandem mass spectrometry to establish a high-resolution seed proteome map. This approach yielded quantitative information for 318 protein spots. Genomic sequence resources for flax are very limited, leaving us with an "unknown function" annotation for 38% of the proteins analyzed including several that comprise very large spots. In addition to the seed storage proteins, we were able to reliably identify 82 proteins many of which are involved with central metabolism.
authors.affiliation: Department of Reproduction and Developmental Biology, Institute of Plant Genetics and Biotechnology, Slovak Academy of Sciences, Nitra, Slovakia.
authors.forename: Katarína
authors.initials: K
authors.lastname: Klubicová
authors.forename: Michal
authors.initials: M
authors.lastname: Berčák
authors.forename: Maksym
authors.initials: M
authors.lastname: Danchenko
authors.forename: Ludovit
authors.initials: L
authors.lastname: Skultety
authors.forename: Namik M
authors.initials: NM
authors.lastname: Rashydov
authors.forename: Valentyna V
authors.initials: VV
authors.lastname: Berezhna
authors.forename: Ján A
authors.initials: JA
authors.lastname: Miernyk
authors.forename: Martin
authors.initials: M
authors.lastname: Hajduch
mesh_terms: D047852:Chernobyl Nuclear Accident; D018556:Crops, Agricultural / Q000254:growth & development / Q000378:metabolism*; D019597:Flax / Q000254:growth & development / Q000378:metabolism*; D010940:Plant Proteins / Q000032:analysis* / Q000378:metabolism; D012639:Seeds / Q000254:growth & development* / Q000378:metabolism*; D057825:Two-Dimensional Difference Gel Electrophoresis
chemical_list: D010940:Plant Proteins