title: A molecular epidemiological investigation of avian paramyxovirus type 1 viruses isolated from game birds of the order Galliformes.
abstract: The partial (370 nucleotides) fusion gene sequences of 55 avian paramyxovirus type 1 (APMV-1) isolates were obtained. Included were 41 published sequences, of which 16 were from strains of APMV-1 of previously determined lineages included as markers for the data analysed and 25 were from APMV-1 viruses isolated from game birds of the order Galliformes. In addition, we sequenced a further 14 game bird isolates obtained from the repository at the Veterinary Laboratories Agency. The game bird isolates had been obtained from 17 countries, and spanned four decades. Earlier studies have shown that class II APMV-1 viruses can be divided into at least 15 lineages and sub-lineages. Phylogenetic analysis revealed that the 39 game bird isolates were distributed across 12 of these sub-lineages. We conclude that no single lineage of Newcastle disease viruses appears to be prevalent in game birds, and the isolates obtained from these hosts reflected the prevailing, both geographically and temporally, viruses in poultry, pigeons or wild birds.
authors.affiliation: Virology Department, Veterinary Laboratories Agency Weybridge, Addlestone, Surrey, UK. e.aldous@VLA.defra.gsi.gov.uk
authors.forename: E W
authors.initials: EW
authors.lastname: Aldous
authors.forename: J K
authors.initials: JK
authors.lastname: Mynn
authors.forename: R M
authors.initials: RM
authors.lastname: Irvine
authors.forename: D J
authors.initials: DJ
authors.lastname: Alexander
authors.forename: I H
authors.initials: IH
authors.lastname: Brown
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D000835:Animals, Wild / Q000235:genetics / Q000821:virology; D001483:Base Sequence; D001715:Bird Diseases / Q000821:virology*; D002642:Chick Embryo; D019143:Evolution, Molecular; D046094:Galliformes / Q000382:microbiology*; D017720:Molecular Epidemiology; D008969:Molecular Sequence Data; D009521:Newcastle Disease / Q000453:epidemiology* / Q000821:virology; D009522:Newcastle disease virus / Q000145:classification / Q000235:genetics*; D010802:Phylogeny; D014760:Viral Fusion Proteins / Q000737:chemistry / Q000235:genetics
chemical_list: D014760:Viral Fusion Proteins