title: Advancing standards for bioinformatics activities: persistence, reproducibility, disambiguation and Minimum Information About a Bioinformatics investigation (MIABi).
abstract: The 2010 International Conference on Bioinformatics, InCoB2010, which is the annual conference of the Asia-Pacific Bioinformatics Network (APBioNet) has agreed to publish conference papers in compliance with the proposed Minimum Information about a Bioinformatics investigation (MIABi), proposed in June 2009. Authors of the conference supplements in BMC Bioinformatics, BMC Genomics and Immunome Research have consented to cooperate in this process, which will include the procedures described herein, where appropriate, to ensure data and software persistence and perpetuity, database and resource re-instantiability and reproducibility of results, author and contributor identity disambiguation and MIABi-compliance. Wherever possible, datasets and databases will be submitted to depositories with standardized terminologies. As standards are evolving, this process is intended as a prelude to the 100 BioDatabases (BioDB100) initiative whereby APBioNet collaborators will contribute exemplar databases to demonstrate the feasibility of standards-compliance and participate in refining the process for peer-review of such publications and validation of scientific claims and standards compliance. This testbed represents another step in advancing standards-based processes in the bioinformatics community which is essential to the growing interoperability of biological data, information, knowledge and computational resources.
authors.affiliation: Department of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, Singapore. tinwee@bic.nus.edu.sg
authors.forename: Tin Wee
authors.initials: TW
authors.lastname: Tan
authors.forename: Joo Chuan
authors.initials: JC
authors.lastname: Tong
authors.forename: Asif M
authors.initials: AM
authors.lastname: Khan
authors.forename: Mark
authors.initials: M
authors.lastname: de Silva
authors.forename: Kuan Siong
authors.initials: KS
authors.lastname: Lim
authors.forename: Shoba
authors.initials: S
authors.lastname: Ranganathan
mesh_terms: D001208:Asia; D019295:Computational Biology / Q000379:methods* / Q000592:standards*; D016208:Databases, Factual; D005240:Feasibility Studies; D023281:Genomics; D006801:Humans; D015203:Reproducibility of Results; D012106:Research; D012984:Software; D009626:Terminology as Topic