title: Voroprot: an interactive tool for the analysis and visualization of complex geometric features of protein structure.
abstract: We present Voroprot, an interactive cross-platform software tool that provides a unique set of capabilities for exploring geometric features of protein structure. Voroprot allows the construction and visualization of the Apollonius diagram (also known as the additively weighted Voronoi diagram), the Apollonius graph, protein alpha shapes, interatomic contact surfaces, solvent accessible surfaces, pockets and cavities inside protein structure.
  
  
  BACKGROUND
  Voroprot is available for Windows, Linux and Mac OS X operating systems and can be downloaded from http://www.ibt.lt/bioinformatics/voroprot/.
authors.affiliation: Institute of Biotechnology, Vilnius University, Vilnius, Lithuania.
authors.forename: Kliment
authors.initials: K
authors.lastname: Olechnovic
authors.forename: Mindaugas
authors.initials: M
authors.lastname: Margelevicius
authors.forename: Ceslovas
authors.initials: C
authors.lastname: Venclovas
mesh_terms: D003196:Computer Graphics; D003198:Computer Simulation; D021621:Imaging, Three-Dimensional / Q000379:methods*; D008958:Models, Molecular; D011487:Protein Conformation; D011506:Proteins / Q000737:chemistry*; D012984:Software
chemical_list: D011506:Proteins