title: Rapid and sensitive Nitrosomonas europaea biosensor assay for quantification of bioavailable ammonium sensu strictu in soil.
abstract: Knowledge on bioavailable ammonium sensu strictu (i.e., immediately available for cellular uptake) in soil is required to understand nutrient uptake processes in microorganisms and thus of vital importance for plant production. We here present a novel ammonium biosensor approach based on the lithoautotrophic ammonia-oxidizing bacterium Nitrosomonas europaea transformed with a luxAB sensor plasmid. Bioluminescence-based ammonium detection was achieved within 10 min with a quantification limit in liquid samples of ∼20 μM and a linear response range up to 400 μM. Biosensor and conventional chemical quantification of ammonium in soil solutions agreed well across a range of sample and assay conditions. The biosensor was subsequently applied for a solid phase-contact assay allowing for direct interaction of biosensor cells with soil particle-associated (i.e., exchangeable plus fixed) ammonium. The assay successfully quantified bioavailable ammonium even in unfertilized soil and demonstrated markedly higher ratios of bioavailable ammonium to water- or 2 M KCl-exchangeable ammonium in anoxic soil than in corresponding oxic soil. Particle-associated ammonium contributed by at least 74% and 93% of the total bioavailable pool in oxic and anoxic soil, respectively. The N. europaea biosensor should have broad relevance for environmental monitoring of bioavailable ammonium and processes depending on ammonium bioavailability.
authors.affiliation: Department of Agriculture and Ecology, Faculty of Life Sciences, University of Copenhagen, DK-1871 Frederiksberg C, Denmark.
authors.forename: Minh Dong
authors.initials: MD
authors.lastname: Nguyen
authors.forename: Nils
authors.initials: N
authors.lastname: Risgaard-Petersen
authors.forename: Jan
authors.initials: J
authors.lastname: Sørensen
authors.forename: Kristian K
authors.initials: KK
authors.lastname: Brandt
mesh_terms: D015374:Biosensing Techniques / Q000379:methods*; D004784:Environmental Monitoring / Q000379:methods*; D006863:Hydrogen-Ion Concentration; D043370:Nitrosomonas europaea / Q000378:metabolism*; D000644:Quaternary Ammonium Compounds / Q000032:analysis / Q000378:metabolism*; D012987:Soil / Q000737:chemistry; D012988:Soil Microbiology; D012989:Soil Pollutants / Q000032:analysis / Q000378:metabolism*
chemical_list: D000644:Quaternary Ammonium Compounds; D012987:Soil; D012989:Soil Pollutants