title: Computational modeling of differences in the quorum sensing induced luminescence phenotypes of Vibrio harveyi and Vibrio cholerae.
abstract: Vibrio harveyi and Vibrio cholerae have quorum sensing pathways with similar design and highly homologous components including multiple small RNAs (sRNAs). However, the associated luminescence phenotypes of strains with sRNA deletions differ dramatically: in V. harveyi, the sRNAs act additively; however, in V. cholerae, the sRNAs act redundantly. Furthermore, there are striking differences in the luminescence phenotypes for different pathway mutants in V. harveyi and V. cholerae. However, these differences have not been connected with the observed differences for the sRNA deletion strains in these bacteria. In this work, we present a model for quorum sensing induced luminescence phenotypes focusing on the interactions of multiple sRNAs with target mRNA. Within our model, we find that one key parameter - the fold-change in protein concentration necessary for luminescence activation - can control whether the sRNAs appear to act additively or redundantly. For specific parameter choices, we find that differences in this key parameter can also explain hitherto unconnected luminescence phenotypes differences for various pathway mutants in V. harveyi and V. cholerae. The model can thus provide a unifying explanation for observed differences in luminescence phenotypes and can also be used to make testable predictions for future experiments.
authors.affiliation: Department of Physics, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061-0435, USA.
authors.forename: Andrew T
authors.initials: AT
authors.lastname: Fenley
authors.forename: Suman K
authors.initials: SK
authors.lastname: Banik
authors.forename: Rahul V
authors.initials: RV
authors.lastname: Kulkarni
mesh_terms: D001426:Bacterial Proteins / Q000378:metabolism; D015169:Colony Count, Microbial; D053263:Gene Regulatory Networks; D049449:Luminescence; D008954:Models, Biological; D009154:Mutation / Q000235:genetics; D010641:Phenotype; D053038:Quorum Sensing / Q000235:genetics; D012329:RNA, Bacterial / Q000378:metabolism; D014733:Vibrio / Q000166:cytology / Q000235:genetics / Q000378:metabolism*
chemical_list: D001426:Bacterial Proteins; D012329:RNA, Bacterial