Ammonium availability affects the ratio of ammonia-oxidizing bacteria to ammonia-oxidizing archaea in simulated creek ecosystems.
The ammonia-oxidizing microbial community colonizing clay tiles in flow channels changed in favor of ammonia-oxidizing bacteria during a 12-week incubation period even at originally high ratios of ammonia-oxidizing archaea to ammonia-oxidizing bacteria (AOB). AOB predominance was established more rapidly in flow channels incubated at 350 μM NH(4)(+) than in those incubated at 50 or 20 μM NH(4)(+). Biofilm-associated potential nitrification activity was first detected after 28 days and was positively correlated with bacterial but not archaeal amoA gene copy numbers.
Institute of Ecology-Limnology/Aquatic Geomicrobiology, Friedrich Schiller University Jena, Dornburger Str. 159, D-07743 Jena, Germany.
Martina
M
Herrmann
Andrea
A
Scheibe
Sharon
S
Avrahami
Kirsten
K
Küsel
D001105:Archaea / Q000145:classification / Q000235:genetics / Q000254:growth & development* / Q000378:metabolism*; D001419:Bacteria / Q000145:classification / Q000235:genetics / Q000254:growth & development* / Q000378:metabolism*; D044822:Biodiversity; D016000:Cluster Analysis; D019641:DNA, Archaeal / Q000737:chemistry / Q000235:genetics; D004269:DNA, Bacterial / Q000737:chemistry / Q000235:genetics; D004275:DNA, Ribosomal / Q000737:chemistry / Q000235:genetics; D017753:Ecosystem; D004783:Environmental Microbiology; D020459:Genes, rRNA; D008969:Molecular Sequence Data; D010084:Oxidation-Reduction; D010802:Phylogeny; D000644:Quaternary Ammonium Compounds / Q000378:metabolism*; D019642:RNA, Archaeal / Q000235:genetics; D012329:RNA, Bacterial / Q000235:genetics; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D017422:Sequence Analysis, DNA; D012689:Sequence Homology, Nucleic Acid
D019641:DNA, Archaeal; D004269:DNA, Bacterial; D004275:DNA, Ribosomal; D000644:Quaternary Ammonium Compounds; D019642:RNA, Archaeal; D012329:RNA, Bacterial; D012336:RNA, Ribosomal, 16S
Nat Rev Microbiol. 2007 Apr;5(4):316-23
17334387
Environ Microbiol. 2008 Nov;10(11):3002-16
18973621
FEMS Microbiol Ecol. 2010 Mar;71(3):364-73
20015334
Environ Microbiol. 2000 Dec;2(6):680-6
11214800
Appl Environ Microbiol. 1999 Aug;65(8):3690-6
10427067
Environ Microbiol. 2008 Nov;10(11):2931-41
18973620
Water Res. 2002 Sep;36(15):3803-11
12369526
Appl Environ Microbiol. 2004 Feb;70(2):1008-16
14766583
Science. 2001 Apr 6;292(5514):86-90
11292868
FEMS Microbiol Ecol. 2010 Jun;72(3):386-94
20370827
Environ Microbiol. 2008 Apr;10(4):1068-79
18266758
Appl Environ Microbiol. 2009 Jul;75(14):4687-95
19465520
Nature. 2009 Oct 15;461(7266):976-9
19794413
Appl Environ Microbiol. 2009 May;75(10):3127-36
19304820
Appl Environ Microbiol. 2010 Apr;76(8):2517-23
20190081
J Appl Microbiol. 2007 Oct;103(4):1239-50
17897228
Proc Natl Acad Sci U S A. 2005 Oct 11;102(41):14683-8
16186488
Appl Environ Microbiol. 2002 Oct;68(10):4751-7
12324316
Appl Environ Microbiol. 2007 Jan;73(1):259-70
17085711
Appl Environ Microbiol. 2007 Oct;73(19):6172-80
17693567
Water Res. 2004 Dec;38(20):4424-34
15556217
Microb Ecol. 1984 Dec;10(4):317-34
24221175
FEMS Microbiol Ecol. 2010 Nov;74(2):302-15
21039647
Appl Environ Microbiol. 2008 May;74(10):3279-83
18344332
Appl Environ Microbiol. 1999 Oct;65(10):4666-71
10508104
Nature. 2005 Sep 22;437(7058):543-6
16177789
Environ Microbiol. 2008 Nov;10(11):2966-78
18707610
Appl Environ Microbiol. 1997 Dec;63(12):4704-12
9406389
Water Sci Technol. 2006;54(6-7):331-8
17120666
Appl Environ Microbiol. 1999 Jul;65(7):3182-91
10388720