Dalliance: interactive genome viewing on the web.
CONCLUSIONS
Dalliance is a new genome viewer which offers a high level of interactivity while running within a web browser. All data is fetched using the established distributed annotation system (DAS) protocol, making it easy to customize the browser and add extra data.


METHODS
Dalliance runs entirely within your web browser, and relies on existing DAS server infrastructure. Browsers for several mammalian genomes are available at http://www.biodalliance.org/, and the use of DAS means you can add your own data to these browsers. In addition, the source code (Javascript) is available under the BSD license, and is straightforward to install on your own web server and embed within other documents.
Wellcome Trust/CRUK Gurdon Institute, Cambridge CB2 1QN, UK. thomas@biodalliance.org
Thomas A
TA
Down
Matias
M
Piipari
Tim J P
TJ
Hubbard
D019295:Computational Biology / Q000379:methods*; D003195:Computer Communication Networks; D003196:Computer Graphics; D016678:Genome; D023281:Genomics / Q000379:methods*; D020407:Internet; D011381:Programming Languages; D012984:Software
Genome Biol. 2002;3(12):RESEARCH0082
12537571
BMC Bioinformatics. 2008 Jul 22;9 Suppl 8:S3
18673527
Nucleic Acids Res. 2010 Jan;38(Database issue):D613-9
19906737
Nat Biotechnol. 2011 Jan;29(1):24-6
21221095
Nucleic Acids Res. 2008 Jan;36(Database issue):D780-6
17932061
Bioinformatics. 2010 Sep 1;26(17):2204-7
20639541
Nucleic Acids Res. 2009 Jan;37(Database issue):D690-7
19033362
Genome Res. 2004 May;14(5):963-70
15123593
Genome Res. 2009 Sep;19(9):1630-8
19570905
Bioinformatics. 2009 Aug 15;25(16):2078-9
19505943
Genome Res. 2002 Oct;12(10):1599-610
12368253