title: Complete genome sequence of Capnocytophaga ochracea type strain (VPI 2845).
abstract: Capnocytophaga ochracea (Prévot et al. 1956) Leadbetter et al. 1982 is the type species of the genus Capnocytophaga. It is of interest because of its location in the Flavobacteriaceae, a genomically not yet charted family within the order Flavobacteriales. The species grows as fusiform to rod shaped cells which tend to form clumps and are able to move by gliding. C. ochracea is known as a capnophilic (CO(2)-requiring) organism with the ability to grow under anaerobic as well as aerobic conditions (oxygen concentration larger than 15%), here only in the presence of 5% CO(2). Strain VPI 2845(T), the type strain of the species, is portrayed in this report as a gliding, Gram-negative bacterium, originally isolated from a human oral cavity. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence from the flavobacterial genus Capnocytophaga, and the 2,612,925 bp long single replicon genome with its 2193 protein-coding and 59 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
authors.forename: Konstantinos
authors.initials: K
authors.lastname: Mavrommatis
authors.forename: Sabine
authors.initials: S
authors.lastname: Gronow
authors.forename: Elizabeth
authors.initials: E
authors.lastname: Saunders
authors.forename: Miriam
authors.initials: M
authors.lastname: Land
authors.forename: Alla
authors.initials: A
authors.lastname: Lapidus
authors.forename: Alex
authors.initials: A
authors.lastname: Copeland
authors.forename: Tijana
authors.initials: T
authors.lastname: Glavina Del Rio
authors.forename: Matt
authors.initials: M
authors.lastname: Nolan
authors.forename: Susan
authors.initials: S
authors.lastname: Lucas
authors.forename: Feng
authors.initials: F
authors.lastname: Chen
authors.forename: Hope
authors.initials: H
authors.lastname: Tice
authors.forename: Jan-Fang
authors.initials: JF
authors.lastname: Cheng
authors.forename: David
authors.initials: D
authors.lastname: Bruce
authors.forename: Lynne
authors.initials: L
authors.lastname: Goodwin
authors.forename: Sam
authors.initials: S
authors.lastname: Pitluck
authors.forename: Amrita
authors.initials: A
authors.lastname: Pati
authors.forename: Natalia
authors.initials: N
authors.lastname: Ivanova
authors.forename: Amy
authors.initials: A
authors.lastname: Chen
authors.forename: Krishna
authors.initials: K
authors.lastname: Palaniappan
authors.forename: Patrick
authors.initials: P
authors.lastname: Chain
authors.forename: Loren
authors.initials: L
authors.lastname: Hauser
authors.forename: Yun-Juan
authors.initials: YJ
authors.lastname: Chang
authors.forename: Cynthia D
authors.initials: CD
authors.lastname: Jeffries
authors.forename: Thomas
authors.initials: T
authors.lastname: Brettin
authors.forename: John C
authors.initials: JC
authors.lastname: Detter
authors.forename: Cliff
authors.initials: C
authors.lastname: Han
authors.forename: James
authors.initials: J
authors.lastname: Bristow
authors.forename: Markus
authors.initials: M
authors.lastname: Göker
authors.forename: Manfred
authors.initials: M
authors.lastname: Rohde
authors.forename: Jonathan A
authors.initials: JA
authors.lastname: Eisen
authors.forename: Victor
authors.initials: V
authors.lastname: Markowitz
authors.forename: Nikos C
authors.initials: NC
authors.lastname: Kyrpides
authors.forename: Hans-Peter
authors.initials: HP
authors.lastname: Klenk
authors.forename: Philip
authors.initials: P
authors.lastname: Hugenholtz