title: 1H, 13C, and 15N resonance assignments for the CTD-interacting domain of Nrd1 bound to Ser5-phosphorylated CTD of RNA polymerase II.
abstract: In this article, we report the resonance assignment of CTD-interacting domain (CID) of pre-mRNA down-regulation (Nrd)1 bound to Ser5-phosphorylated CTD (pSer5) of RNA Polymerase II. The presented assignment of backbone and side-chain resonances of the Nrd1 CID proton, carbon and nitrogen nuclei will allow studies of the structure and interaction of CID with carboxy-terminal domain (CTD) of the RNA polymerase II.
authors.affiliation: National Centre for Biomolecular Research, Central European Institute of Technology, Faculty of Science, Masaryk University, 62500, Brno, Czech Republic. karelk@chemi.muni.cz
authors.forename: Karel
authors.initials: K
authors.lastname: Kubíček
authors.forename: Josef
authors.initials: J
authors.lastname: Pasulka
authors.forename: Hana
authors.initials: H
authors.lastname: Černá
authors.forename: Frank
authors.initials: F
authors.lastname: Löhr
authors.forename: Richard
authors.initials: R
authors.lastname: Štefl
mesh_terms: D001665:Binding Sites; D015536:Down-Regulation; D007554:Isotopes / Q000737:chemistry; D019906:Nuclear Magnetic Resonance, Biomolecular; D010455:Peptides / Q000737:chemistry / Q000378:metabolism; D010766:Phosphorylation; D011485:Protein Binding; D017434:Protein Structure, Tertiary; D012319:RNA Polymerase II / Q000737:chemistry* / Q000378:metabolism; D016601:RNA-Binding Proteins / Q000737:chemistry* / Q000378:metabolism; D029701:Saccharomyces cerevisiae Proteins / Q000737:chemistry* / Q000378:metabolism; D012694:Serine / Q000737:chemistry / Q000378:metabolism
chemical_list: D007554:Isotopes; C491211:NRD1 protein, S cerevisiae; D010455:Peptides; D016601:RNA-Binding Proteins; D029701:Saccharomyces cerevisiae Proteins; D012694:Serine; D012319:RNA Polymerase II