title: Phytophthora himalsilva sp. nov. an unusually phenotypically variable species from a remote forest in Nepal.
abstract: The Himalaya have received little investigation for Phytophthora species. In a remote forest in Western Nepal ten isolates of an unknown Phytophthora were recovered from the rhizosphere of Quercus, Castanopsis, Carpinus and Cupressus spp. The Phytophthora, formally named here as a P. himalsilva sp. nov., is homothallic with either amphigynous or paragynous antheridia and papillate, highly variable sporangia which may also be facultatively caducous. Based on ITS, β-tubulin, and cox I sequences Phytophthora himalsilva falls within Phytophthora Clade 2c together with Phytophthora citrophthora, Phytophthora meadii, Phytophthora colocasiae, and Phytophthora botryosa. It is suggested that Clade 2c has radiated within Asia. Molecular and sporangial characters indicate that P. himalsilva and P. citrophthora may share a recent common ancestor although they have diverged in their breeding systems. Although highly local the P. himalsilva isolates exhibited significant variation in growth rates and optimum temperatures for growth. This may reflect adaptation to different niches within a heterogeneous sub-tropical to temperate forest environment. Their cox I polymorphisms were also rather variable, including possible clustering for subsite. The occurrence of a previously unknown Phytophthora in a remote forest in Nepal highlights once again the plant health risk associated with moving rooted plants and soil between different bio-geographical regions of the world and the need for rapid pathological screening of potential risk organisms.
authors.affiliation: Department of Plant Protection, University of Tuscia, Via S. Camillo de Lellis, Viterbo, Italy.
authors.forename: Anna Maria
authors.initials: AM
authors.lastname: Vettraino
authors.forename: Clive M
authors.initials: CM
authors.lastname: Brasier
authors.forename: Anna V
authors.initials: AV
authors.lastname: Brown
authors.forename: Andrea
authors.initials: A
authors.lastname: Vannini
mesh_terms: D004271:DNA, Fungal / Q000032:analysis / Q000235:genetics; D021903:DNA, Ribosomal Spacer / Q000032:analysis / Q000235:genetics; D031324:Juglans / Q000382:microbiology; D008969:Molecular Sequence Data; D009390:Nepal; D010641:Phenotype; D010802:Phylogeny; D010838:Phytophthora / Q000145:classification* / Q000235:genetics / Q000254:growth & development / Q000302:isolation & purification; D010935:Plant Diseases / Q000382:microbiology; D018517:Plant Roots / Q000382:microbiology; D029963:Quercus / Q000382:microbiology; D058441:Rhizosphere; D017422:Sequence Analysis, DNA; D012988:Soil Microbiology; D013045:Species Specificity; D014197:Trees / Q000382:microbiology*; D014404:Tubulin / Q000235:genetics
chemical_list: D004271:DNA, Fungal; D021903:DNA, Ribosomal Spacer; D014404:Tubulin