title: Optimal DNA tier for the IRT/DNA algorithm determined by CFTR mutation results over 14 years of newborn screening.
abstract: BACKGROUND
  There has been great variation and uncertainty about how many and what CFTR mutations to include in cystic fibrosis (CF) newborn screening algorithms, and very little research on this topic using large populations of newborns.
  
  
  METHODS
  We reviewed Wisconsin screening results for 1994-2008 to identify an ideal panel.
  
  
  RESULTS
  Upon analyzing approximately 1 million screening results, we found it optimal to use a 23 CFTR mutation panel as a second tier when an immunoreactive trypsinogen (IRT)/DNA algorithm was applied for CF screening. This panel in association with a 96th percentile IRT cutoff gave a sensitivity of 97.3%, but restricting the DNA tier to F508del was associated with 90% (P<.0001).
  
  
  CONCLUSIONS
  Although CFTR panel selection has been challenging, our data show that a 23 mutation method optimizes sensitivity and is advantageous. The IRT cutoff value, however, is actually more critical than DNA in determining CF newborn screening sensitivity.
authors.affiliation: School of Medicine and Public Health, Newborn Screening Laboratory, Wisconsin State Laboratory of Hygiene, University of Wisconsin-Madison, Madison, WI 53706, USA.
authors.forename: Mei W
authors.initials: MW
authors.lastname: Baker
authors.forename: Molly
authors.initials: M
authors.lastname: Groose
authors.forename: Gary
authors.initials: G
authors.lastname: Hoffman
authors.forename: Michael
authors.initials: M
authors.lastname: Rock
authors.forename: Hara
authors.initials: H
authors.lastname: Levy
authors.forename: Philip M
authors.initials: PM
authors.lastname: Farrell
mesh_terms: D000465:Algorithms; D003550:Cystic Fibrosis / Q000175:diagnosis* / Q000453:epidemiology / Q000235:genetics*; D004252:DNA Mutational Analysis / Q000379:methods / Q000592:standards; D005188:False Negative Reactions; D005820:Genetic Testing / Q000379:methods* / Q000592:standards; D006801:Humans; D007231:Infant, Newborn; D020125:Mutation, Missense; D015997:Neonatal Screening / Q000379:methods* / Q000592:standards; D018570:Risk Assessment / Q000379:methods; D012307:Risk Factors; D012680:Sensitivity and Specificity