title: "Directed" assembly of metallacalix[n]arenes with pyrimidine nucleobase ligands of low symmetry: metallacalix[n]arene derivatives of cis-[a2M(cytosine-N3)2]2+ (M=Pt(II), Pd(II); n=4 and 6).
abstract: Pyrimidine (pym) ligands with their two endocyclic N-donor atoms provide 120° angles for molecular constructs, which, with the 90° angle metal fragments cis-a(2)M(II) (M=Pt, Pd; a=NH(3) or a(2)=diamine), form cyclic complexes known as metallacalix[n]arenes (with n=3, 4, 6, 8, …). The number of possible isomers of these species depends on the symmetry of the pym ligand. Although highly symmetrical (C(2v)) pym ligands form a single linkage isomer for any n and can adopt different conformations (e.g., cone, partial cone, 1,3-alternate, and 1,2-alternate in the case of n=4), low-symmetry pym ligands (C(s)) can produce a higher number of linkage isomers (e.g., four in the case of n=4) and a large number of different conformers. In the absence of any self-sorting bias, the number of possible species derived from a self-assembly process between cis-a(2)M(II) and a C(s)-symmetrical pym ligand can thus be very high. By using the C(s)-symmetric pym nucleobase cytosine, we have demonstrated that the number of feasible isomers for n=4 can be reduced to one by applying preformed building blocks such as cis-[a(2)M(cytosine-N3)(2)](n+) or cis-[a(2)M(cytosinate-N1)(2)] (for the latter, see the accompanying paper: A. Khutia, P. J. Sanz Miguel, B. Lippert, Chem. Eur. J. 2011, 17, DOI: 10.1002/chem.2010002723) and treating them with additional cis-a(2)M(II) . Moreover, intramolecular hydrogen-bonding interactions between the O2 and N4H(2) sites of the cytosine ligands reduce the number of possible rotamers to one. This approach of the "directed" assembly of a defined metallacalix[4]arene is demonstrated.
authors.affiliation: Fakultät Chemie, Technische Unversität Dortmund, Otto-Hahn-Strasse 6, 44221 Dortmund, Germany.
authors.forename: Anupam
authors.initials: A
authors.lastname: Khutia
authors.forename: Pablo J
authors.initials: PJ
authors.lastname: Sanz Miguel
authors.forename: Bernhard
authors.initials: B
authors.lastname: Lippert
mesh_terms: D047250:Calixarenes / Q000737:chemistry*; D003596:Cytosine / Q000737:chemistry*; D006571:Heterocyclic Compounds / Q000737:chemistry*; D007536:Isomerism; D008024:Ligands; D009682:Magnetic Resonance Spectroscopy; D008958:Models, Molecular; D015394:Molecular Structure; D010165:Palladium / Q000737:chemistry*; D010984:Platinum / Q000737:chemistry*; D011743:Pyrimidines / Q000737:chemistry*
chemical_list: D006571:Heterocyclic Compounds; D008024:Ligands; D011743:Pyrimidines; D047250:Calixarenes; D010984:Platinum; D010165:Palladium; D003596:Cytosine