title: [Screening cold-acclimation differential expression candidate genes in the brain of common carp (Cyprinus carpio)].
abstract: In this study, 26 candidate genes were quantified and normalized in the brain cDNA of common carp (Cyprinus carpio) at 23°C and 6°C using double-standard curve method of real-time quantitative PCR. The results showed that five candidates up-regulated in the samples at 6°C (P<0.01) and quantified 2.11, 13.9, 2.52, 7.38, and 1.83 times more than in the samples at 23°C, respectively. Gene function searching indicated that the protein products of these five candidates were elongation of very long chain fatty acids protein, Acyl-CoA desaturase, Transcription initiation factor IIB, Myo-inositol- 1-phosphate synthase, and Blood-brain barrier HT7 antigen individually. Moreover, seven down-regulated candidates were also identified in the same samples at 6°C (P>0.05), and their expression levels were decreased by 21.8%, 25.9%, 16.6%, 23.7%, 15.8%, 16.3%, and 42.5%, respectively, in comparison with the samples at 23°C. These seven down-regulated candidates mainly participated in the inhibition of glycolysis, improvement of cell apoptosis, and intervention of synapse remodeling based on the results of function searching. The five cold-induced genes identified in this study will be used as important elements for fish with cold sensitive through transgenic technology in future.
authors.affiliation: Heilongjiang River Fisheries Research Institute, Chinese Academy of Fishery Sciences, Harbin 150070, China. zhengrong221@126.com
authors.forename: Li-Hua
authors.initials: LH
authors.lastname: Xu
authors.forename: Yu-Mei
authors.initials: YM
authors.lastname: Chang
authors.forename: Chun-Lei
authors.initials: CL
authors.lastname: Liu
authors.forename: Li-Qun
authors.initials: LQ
authors.lastname: Liang
authors.forename: Jin-Liang
authors.initials: JL
authors.lastname: Liu
authors.forename: Bing-Jie
authors.initials: BJ
authors.lastname: Chi
mesh_terms: D000064:Acclimatization / Q000235:genetics*; D000818:Animals; D001921:Brain / Q000378:metabolism*; D001947:Breeding; D002138:Calibration; D002347:Carps / Q000235:genetics* / Q000502:physiology*; D003001:Cloning, Molecular; D003080:Cold Temperature; D018076:DNA, Complementary / Q000235:genetics; D005786:Gene Expression Regulation; D016133:Polymerase Chain Reaction; D012313:RNA / Q000235:genetics / Q000302:isolation & purification
chemical_list: D018076:DNA, Complementary; D012313:RNA