title: Coumarin 6 and 1,6-diphenyl-1,3,5-hexatriene (DPH) as fluorescent probes to monitor protein aggregation.
abstract: We report the use of Coumarin 6 and 1,6-diphenyl-1,3,5-hexatriene (DPH) for the identification of protein aggregates for the first time. The two dyes can be used at very low (nanomolar) concentrations and do not interfere with the aggregation process, as is reported for other commonly used fluorescent protein probes. In the presence of protein aggregates, their quantum yields are significantly high. DPH is able to recognize both amorphous and fibrillar aggregates but cannot distinguish between them. Coumarin 6 can distinguish between both types of aggregates. It also exhibits the characteristic sigmoidal curve of amyloid formation, with higher sensitivity for detection of fibrillation than the conventionally used Thioflavin T.
authors: Department of Biotechnology, National Institute of Pharmaceutical Education and Research, S.A.S. Nagar, Punjab, India.
authors: Pinakin K
authors: PK
authors: Makwana
authors: Prashant N
authors: PN
authors: Jethva
authors: Ipsita
authors: I
authors: Roy
mesh_terms: D052160:Benzothiazoles; D002256:Carbonic Anhydrases / Q000737:chemistry / Q000378:metabolism; D003374:Coumarins / Q000737:chemistry*; D004161:Diphenylhexatriene / Q000737:chemistry*; D005456:Fluorescent Dyes / Q000737:chemistry*; D011506:Proteins / Q000737:chemistry* / Q000378:metabolism; D011789:Quantum Theory; D013050:Spectrometry, Fluorescence / Q000379:methods*; D013844:Thiazoles / Q000737:chemistry*; D051844:alpha-Synuclein / Q000737:chemistry / Q000378:metabolism
chemical_list: D052160:Benzothiazoles; D003374:Coumarins; D005456:Fluorescent Dyes; D011506:Proteins; D013844:Thiazoles; D051844:alpha-Synuclein; C517282:coumarin 6; D004161:Diphenylhexatriene; C009462:thioflavin T; D002256:Carbonic Anhydrases