title: Soil and plant factors driving the community of soil-borne microorganisms across chronosequences of secondary succession of chalk grasslands with a neutral pH.
abstract: Although soil pH has been shown to be an important factor driving microbial communities, relatively little is known about the other potentially important factors that shape soil-borne microbial community structure. This study examined plant and microbial communities across a series of neutral pH fields (pH=7.0-7.5) representing a chronosequence of secondary succession after former arable fields were taken out of production. These fields ranged from 17 to >66 years since the time of abandonment, and an adjacent arable field was included as a reference. Hierarchical clustering analysis, nonmetric multidimensional scaling and analysis of similarity of 52 different plant species showed that the plant community composition was significantly different in the different chronosequences, and that plant species richness and diversity increased with time since abandonment. The microbial community structure, as analyzed by phylogenetic microarrays (PhyloChips), was significantly different in arable field and the early succession stage, but no distinct microbial communities were observed for the intermediate and the late succession stages. The most determinant factors in shaping the soil-borne microbial communities were phosphorous and NH(4)(+). Plant community composition and diversity did not have a significant effect on the belowground microbial community structure or diversity.
authors.affiliation: Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands. e.kuramae@nioo.knaw.nl
authors.forename: Eiko
authors.initials: E
authors.lastname: Kuramae
authors.forename: Hannes
authors.initials: H
authors.lastname: Gamper
authors.forename: Johannes
authors.initials: J
authors.lastname: van Veen
authors.forename: George
authors.initials: G
authors.lastname: Kowalchuk
mesh_terms: D001419:Bacteria / Q000145:classification / Q000235:genetics / Q000302:isolation & purification*; D058448:Biota; D002119:Calcium Carbonate; D016000:Cluster Analysis; D006863:Hydrogen-Ion Concentration; D009426:Netherlands; D010802:Phylogeny; D063245:Plant Development; D006109:Poaceae / Q000254:growth & development; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D012987:Soil / Q000737:chemistry*; D012988:Soil Microbiology; D013997:Time Factors
chemical_list: D012336:RNA, Ribosomal, 16S; D012987:Soil; D002119:Calcium Carbonate