title: Reliability-oriented bioinformatic networks visualization.
abstract: CONCLUSIONS
  We present our protein-protein interaction (PPI) network visualization system RobinViz (reliability-oriented bioinformatic networks visualization). Clustering the PPI network based on gene ontology (GO) annotations or biclustered gene expression data, providing a clustered visualization model based on a central/peripheral duality, computing layouts with algorithms specialized for interaction reliabilities represented as weights, completely automated data acquisition, processing are notable features of the system.
  
  
  BACKGROUND
  RobinViz is a free, open-source software protected under GPL. It is written in C++ and Python, and consists of almost 30 000 lines of code, excluding the employed libraries. Source code, user manual and other Supplementary Material are available for download at http://code.google.com/p/robinviz/.
authors.affiliation: Department of Computer Engineering, Kadir Has University, Cibali, Istanbul 34083.
authors.forename: Ahmet Emre
authors.initials: AE
authors.lastname: Aladağ
authors.forename: Cesim
authors.initials: C
authors.lastname: Erten
authors.forename: Melih
authors.initials: M
authors.lastname: Sözdinler
mesh_terms: D000465:Algorithms; D016000:Cluster Analysis; D003196:Computer Graphics; D025941:Protein Interaction Mapping; D012984:Software