title: A transcriptome signature distinguished sporadic from postradiotherapy radiation-induced sarcomas.
abstract: Exposure to ionizing radiation is a known risk factor for cancer. However, up to now, rigorously defined scientific criteria that could establish case-by-case the radiation-induced (RI) origin of a tumour have been lacking. To identify genes that could constitute a RI signature, we compared the transcriptome of 12 sarcomas arising in the irradiation field of a primary tumour following radiotherapy with the transcriptome of 12 sporadic sarcomas. This learning/training set contained four leiomyosarcomas, four osteosarcomas and four angiosarcomas in each subgroup. We identified a signature of 135 genes discriminating RI from sporadic sarcomas. The robustness of this signature was tested by the blind case-by-case classification of an independent set of 36 sarcomas of various histologies. Thirty-one sarcomas were classified as RI or sporadic; it was not possible to propose an aetiology for the five others. After the code break, it was found that one sporadic sarcoma was misclassified as RI. Thus, the signature is robust with a sensitivity of 96%, a positive and a negative predictive value of 96 and 100%, respectively and a specificity of 62%. The functions of the genes of the signature suggest that RI sarcomas were subject to chronic oxidative stress probably due to mitochondrial dysfunction.
authors.affiliation: Institut Curie, Centre de Recherche, UMR3244, 26 Rue d'Ulm, Paris Cedex 5 F-75248, France.
authors.forename: Nabila-Sandra
authors.initials: NS
authors.lastname: Hadj-Hamou
authors.forename: Nicolas
authors.initials: N
authors.lastname: Ugolin
authors.forename: Catherine
authors.initials: C
authors.lastname: Ory
authors.forename: Nathalie
authors.initials: N
authors.lastname: Britzen-Laurent
authors.forename: Xavier
authors.initials: X
authors.lastname: Sastre-Garau
authors.forename: Sylvie
authors.initials: S
authors.lastname: Chevillard
authors.forename: Bernard
authors.initials: B
authors.lastname: Malfoy
mesh_terms: D000293:Adolescent; D000328:Adult; D000368:Aged; D014408:Biomarkers, Tumor / Q000235:genetics*; D001943:Breast Neoplasms / Q000150:complications* / Q000532:radiotherapy; D005260:Female; D020869:Gene Expression Profiling; D006801:Humans; D008875:Middle Aged; D009381:Neoplasms, Radiation-Induced / Q000209:etiology*; D016609:Neoplasms, Second Primary / Q000209:etiology*; D020411:Oligonucleotide Array Sequence Analysis; D012333:RNA, Messenger; D011878:Radiotherapy / Q000009:adverse effects*; D012175:Retinoblastoma / Q000150:complications* / Q000532:radiotherapy; D020133:Reverse Transcriptase Polymerase Chain Reaction; D012509:Sarcoma / Q000209:etiology*; D055815:Young Adult
chemical_list: D014408:Biomarkers, Tumor; D012333:RNA, Messenger