title: Analysis of image sharpness reproducibility on a novel engineered micro-CT scanner with variable geometry and embedded recalibration software.
abstract: This study investigates the reproducibility of the reconstructed image sharpness, after modifications of the geometry setup, for a variable magnification micro-CT (μCT) scanner. All the measurements were performed on a novel engineered μCT scanner for in vivo imaging of small animals (Xalt), which has been recently built at the Institute of Clinical Physiology of the National Research Council (IFC-CNR, Pisa, Italy), in partnership with the University of Pisa. The Xalt scanner is equipped with an integrated software for on-line geometric recalibration, which will be used throughout the experiments. In order to evaluate the losses of image quality due to modifications of the geometry setup, we have made 22 consecutive acquisitions by changing alternatively the system geometry between two different setups (Large FoV - LF, and High Resolution - HR). For each acquisition, the tomographic images have been reconstructed before and after the on-line geometric recalibration. For each reconstruction, the image sharpness was evaluated using two different figures of merit: (i) the percentage contrast on a small bar pattern of fixed frequency (f = 5.5 lp/mm for the LF setup and f = 10 lp/mm for the HR setup) and (ii) the image entropy. We have found that, due to the small-scale mechanical uncertainty (in the order of the voxel size), a recalibration is necessary for each geometric setup after repositioning of the system's components; the resolution losses due to the lack of recalibration are worse for the HR setup (voxel size = 18.4 μm). The integrated on-line recalibration algorithm of the Xalt scanner allowed to perform the recalibration quickly, by restoring the spatial resolution of the system to the reference resolution obtained after the initial (off-line) calibration.
authors.affiliation: CNR Institute of Clinical Physiology, Pisa, Italy. dpanetta@ifc.cnr.it
authors.forename: D
authors.initials: D
authors.lastname: Panetta
authors.forename: N
authors.initials: N
authors.lastname: Belcari
authors.forename: A
authors.initials: A
authors.lastname: Del Guerra
authors.forename: A
authors.initials: A
authors.lastname: Bartolomei
authors.forename: P A
authors.initials: PA
authors.lastname: Salvadori
mesh_terms: D000818:Animals; D002138:Calibration; D004738:Engineering; D007091:Image Processing, Computer-Assisted / Q000379:methods*; D055595:Mechanical Phenomena; D051379:Mice; D015203:Reproducibility of Results; D012984:Software; D055114:X-Ray Microtomography / Q000295:instrumentation*