title: Eukaryotic initiation factor 6, an evolutionarily conserved regulator of ribosome biogenesis and protein translation.
abstract: We recently identified Receptor for Activated C Kinase 1 (RACK1) as one of the molecular links between abscisic acid (ABA) signaling and its regulation on protein translation. Moreover, we identified Eukaryotic Initiation Factor 6 (eIF6) as an interacting partner of RACK1. Because the interaction between RACK1 and eIF6 in mammalian cells is known to regulate the ribosome assembly step of protein translation initiation, it was hypothesized that the same process of protein translation in Arabidopsis is also regulated by RACK1 and eIF6. In this article, we analyzed the amino acid sequences of eIF6 in different species from different lineages and discovered some intriguing differences in protein phosphorylation sites that may contribute to its action in ribosome assembly and biogenesis. In addition, we discovered that, distinct from non-plant organisms in which eIF6 is encoded by a single gene, all sequenced plant genomes contain two or more copies of eIF6 genes. While one copy of plant eIF6 is expressed ubiquitously and might possess the conserved function in ribosome biogenesis and protein translation, the other copy seems to be only expressed in specific organs and therefore may have gained some new functions. We proposed some important studies that may help us better understand the function of eIF6 in plants.
authors.affiliation: Department of Genetics, Harvard Medical School, Boston, MA, USA.
authors.forename: Jianjun
authors.initials: J
authors.lastname: Guo
authors.forename: Zhaoqing
authors.initials: Z
authors.lastname: Jin
authors.forename: Xiaohan
authors.initials: X
authors.lastname: Yang
authors.forename: Jian-Feng
authors.initials: JF
authors.lastname: Li
authors.forename: Jin-Gui
authors.initials: JG
authors.lastname: Chen
mesh_terms: D000595:Amino Acid Sequence; D017124:Conserved Sequence / Q000235:genetics*; D039642:Eukaryotic Initiation Factors / Q000737:chemistry / Q000378:metabolism*; D019143:Evolution, Molecular; D014644:Genetic Variation; D008954:Models, Biological; D008969:Molecular Sequence Data; D014176:Protein Biosynthesis; D012270:Ribosomes / Q000378:metabolism*; D016415:Sequence Alignment
chemical_list: D039642:Eukaryotic Initiation Factors