title: Selection and optimization of PCR-based methods for the detection of Histoplasma capsulatum var. capsulatum.
abstract: BACKGROUND
  Current methods for the laboratory diagnosis of histoplasmosis are problematic in terms of their sensitivity, specificity and runtime.
  
  
  OBJECTIVE
  Thus, in this study, we sought to select and optimize methods for the detection of Histoplasma capsulatum var. capsulatum by polymerase chain reaction (PCR).
  
  
  METHODS
  Three DNA extraction methods and three PCR methods were evaluated. We optimised the concentration of the components of this PCR reaction and determined its sensitivity and specificity using blood samples to which H. capsulatum had been added.
  
  
  RESULTS
  The DNA extraction method that yielded the highest-quality DNA used silica membranes (DNeasy Blood & Tissue Kit, Qiagen, Hilden, Germany), and the amplification method with the best detection capacity used a target gene encoding a 100-kDa protein. Our optimisation of the PCR conditions indicated that the reaction works over a significant range of component concentrations; in addition, it was able to detect H. capsulatum better than traditional culture techniques, with a detection limit of only 10 pg of DNA.
  
  
  CONCLUSIONS
  In our experimental conditions, the PCR method selected in this work (instead of nested-PCR) is a tool sensitive enough for the diagnosis of histoplasmosis.
authors.affiliation: College of Health Sciences, Universidade do Estado do Amazonas, Manaus, AM, Brazil.
authors.forename: Ivanete De Lima
authors.initials: Ide L
authors.lastname: Sampaio
authors.forename: Ana Karla Lima
authors.initials: AK
authors.lastname: Freire
authors.forename: Mauricio Morishi
authors.initials: MM
authors.lastname: Ogusko
authors.forename: Júlia Ignez
authors.initials: JI
authors.lastname: Salem
authors.forename: João Vicente Braga
authors.initials: JV
authors.lastname: De Souza
mesh_terms: D006658:Histoplasma / Q000235:genetics* / Q000302:isolation & purification*; D016133:Polymerase Chain Reaction / Q000379:methods*