title: Detection of effects of a high trophic level predator, Sorex unguiculatus (Soricidae, Mammalia), on a soil microbial community in a cool temperate forest in Hokkaido, using the ARISA method.
abstract: Soil bacteria play important roles as litter decomposers in most terrestrial ecosystems and microbial activity is affected by activities of soil invertebrates. In soil ecosystems of forests in Hokkaido, the long-clawed shrew is an important predator whose preying on soil invertebrates may indirectly affect soil bacterial communities. To estimate indirect top-down effects of shrews on the soil bacterial community, field experiments were conducted using enclosures in which shrews were introduced and removed, and changes in bacterial community composition, species richness, diversity, and evenness were observed using automated ribosomal intergenic spacer analysis (ARISA). Abiotic environmental conditions (ambient temperature, soil temperature, soil moisture content and soil pH) were also considered. Bacterial community structure was significantly affected by soil moisture content and soil temperature. The significant causes of the change in bacterial species richness, diversity, and evenness varied among experimental treatments; however, soil moisture tended to have significantly negative effects on these indices in all cases. In the present study, effects of shrews on the bacterial community were not detected.
authors.affiliation: Institute of Low Temperature Science, Hokkaido University, Kita-19 Nishi-8, Kita-ku, Sapporo, Hokkaido 060–0819, Japan.
authors.forename: Kana
authors.initials: K
authors.lastname: Yamamoto
authors.forename: Satoshi D
authors.initials: SD
authors.lastname: Ohdachi
authors.forename: Yasuhiro
authors.initials: Y
authors.lastname: Kasahara
mesh_terms: D000818:Animals; D001419:Bacteria / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification*; D044822:Biodiversity; D003080:Cold Temperature; D004269:DNA, Bacterial / Q000737:chemistry / Q000235:genetics; D021901:DNA, Intergenic / Q000737:chemistry / Q000235:genetics; D007312:Eulipotyphla / Q000254:growth & development / Q000502:physiology*; D007564:Japan; D008969:Molecular Sequence Data; D017422:Sequence Analysis, DNA; D012988:Soil Microbiology; D014197:Trees
chemical_list: D004269:DNA, Bacterial; D021901:DNA, Intergenic