title: Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing.
abstract: Phylemon 2.0 is a new release of the suite of web tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing. It has been designed as a response to the increasing demand of molecular sequence analyses for experts and non-expert users. Phylemon 2.0 has several unique features that differentiates it from other similar web resources: (i) it offers an integrated environment that enables evolutionary analyses, format conversion, file storage and edition of results; (ii) it suggests further analyses, thereby guiding the users through the web server; and (iii) it allows users to design and save phylogenetic pipelines to be used over multiple genes (phylogenomics). Altogether, Phylemon 2.0 integrates a suite of 30 tools covering sequence alignment reconstruction and trimming; tree reconstruction, visualization and manipulation; and evolutionary hypotheses testing.
authors.affiliation: Evolutionary Genomics Lab, Bioinformatics and Genomics Department, Centro de Investigación Príncipe Felipe, Autopista del Saler, 16-3, 46013 Valencia, Spain.
authors.forename: Rubén
authors.initials: R
authors.lastname: Sánchez
authors.forename: François
authors.initials: F
authors.lastname: Serra
authors.forename: Joaquín
authors.initials: J
authors.lastname: Tárraga
authors.forename: Ignacio
authors.initials: I
authors.lastname: Medina
authors.forename: José
authors.initials: J
authors.lastname: Carbonell
authors.forename: Luis
authors.initials: L
authors.lastname: Pulido
authors.forename: Alejandro
authors.initials: A
authors.lastname: de María
authors.forename: Salvador
authors.initials: S
authors.lastname: Capella-Gutíerrez
authors.forename: Jaime
authors.initials: J
authors.lastname: Huerta-Cepas
authors.forename: Toni
authors.initials: T
authors.lastname: Gabaldón
authors.forename: Joaquín
authors.initials: J
authors.lastname: Dopazo
authors.forename: Hernán
authors.initials: H
authors.lastname: Dopazo
mesh_terms: D019143:Evolution, Molecular; D023281:Genomics; D020407:Internet; D010802:Phylogeny; D016415:Sequence Alignment; D012984:Software