title: Comparative transcriptome analysis of Bacillus subtilis responding to dissolved oxygen in adenosine fermentation.
abstract: Dissolved oxygen (DO) is an important factor for adenosine fermentation. Our previous experiments have shown that low oxygen supply in the growth period was optimal for high adenosine yield. Herein, to better understand the link between oxygen supply and adenosine productivity in B. subtilis (ATCC21616), we sought to systematically explore the effect of DO on genetic regulation and metabolism through transcriptome analysis. The microarrays representing 4,106 genes were used to study temporal transcript profiles of B. subtilis fermentation in response to high oxygen supply (agitation 700 r/min) and low oxygen supply (agitation 450 r/min). The transcriptome data analysis revealed that low oxygen supply has three major effects on metabolism: enhance carbon metabolism (glucose metabolism, pyruvate metabolism and carbon overflow), inhibit degradation of nitrogen sources (glutamate family amino acids and xanthine) and purine synthesis. Inhibition of xanthine degradation was the reason that low oxygen supply enhanced adenosine production. These provide us with potential targets, which can be modified to achieve higher adenosine yield. Expression of genes involved in energy, cell type differentiation, protein synthesis was also influenced by oxygen supply. These results provided new insights into the relationship between oxygen supply and metabolism.
authors.affiliation: Lab of Biosystems and Microanalysis, East China University of Science and Technology, Shanghai, China.
authors.forename: Wen-Bang
authors.initials: WB
authors.lastname: Yu
authors.forename: Shu-Hong
authors.initials: SH
authors.lastname: Gao
authors.forename: Chun-Yun
authors.initials: CY
authors.lastname: Yin
authors.forename: Ying
authors.initials: Y
authors.lastname: Zhou
authors.forename: Bang-Ce
authors.initials: BC
authors.lastname: Ye
mesh_terms: D000241:Adenosine / Q000378:metabolism*; D001412:Bacillus subtilis / Q000235:genetics*; D005285:Fermentation; D020869:Gene Expression Profiling; D005798:Genes, Bacterial; D010100:Oxygen / Q000378:metabolism*; D012995:Solubility
chemical_list: D000241:Adenosine; D010100:Oxygen