title: A monoclonal antibody distinguishes between two IgM heavy chain isotypes in Atlantic salmon and brown trout: protein characterization, 3D modeling and epitope mapping.
abstract: Atlantic salmon (Salmo salar) and brown trout (Salmo trutta) possess two distinct subpopulations of IgM which can be separated by anion exchange chromatography. Accordingly, there are two isotypic μ genes in these species, related to ancestral tetraploidy. In the present work it was verified by mass spectrometry that IgM of peak 1 (subpopulation 1) have heavy chains previously designated as μB type whereas IgM of peak 2 (subpopulation 2) have heavy chains of μA type. Two adjacent cysteine residues are present near the C-terminal part of μB, in contrast to one cysteine residue in μA. Salmon IgM of both peak 1 and peak 2 contain light chains of the two most common isotypes: IgL1 and IgL3. In contrast to salmon and brown trout, IgM of rainbow trout (Oncorhynchus mykiss) is eluted in a single peak when subjected to anion exchange chromatography. Surprisingly, a monoclonal antibody MAb4C10 against rainbow trout IgM, reacted with μA in salmon, whereas in brown trout it reacted with μB. It is plausible to assume that DNA has been exchanged between the paralogous A and B loci during evolution while maintaining the two sub-variants, with and without the extra cysteine. MAb4C10 was conjugated to magnetic beads and used to separate cells, demonstrating that μ transcripts residing from captured cells were primarily of A type in salmon and B type in brown trout. An analysis of amino acid substitutions in μA and μB of salmon and brown trout indicated that the third constant domain is essential for MAb4C10 binding. This was supported by 3D modeling and was finally verified by studies of MAb4C10 reactivity with a series of recombinant μ3 constructs.
authors.affiliation: University of Bergen, Department of Biology, N-5020 Bergen, Norway.
authors.forename: Atif
authors.initials: A
authors.lastname: Kamil
authors.forename: Knut
authors.initials: K
authors.lastname: Falk
authors.forename: Animesh
authors.initials: A
authors.lastname: Sharma
authors.forename: Arnt
authors.initials: A
authors.lastname: Raae
authors.forename: Frode
authors.initials: F
authors.lastname: Berven
authors.forename: Erling Olaf
authors.initials: EO
authors.lastname: Koppang
authors.forename: Ivar
authors.initials: I
authors.lastname: Hordvik
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D000911:Antibodies, Monoclonal; D001483:Base Sequence; D015153:Blotting, Western; D002469:Cell Separation; D018604:Epitope Mapping; D005434:Flow Cytometry; D007148:Immunoglobulin mu-Chains / Q000737:chemistry* / Q000235:genetics*; D013058:Mass Spectrometry; D008958:Models, Molecular; D008968:Molecular Conformation; D008969:Molecular Sequence Data; D016133:Polymerase Chain Reaction; D020033:Protein Isoforms; D020317:Salmo salar / Q000235:genetics* / Q000276:immunology; D014337:Trout / Q000235:genetics* / Q000276:immunology
chemical_list: D000911:Antibodies, Monoclonal; D007148:Immunoglobulin mu-Chains; D020033:Protein Isoforms