title: The mechanism of a nuclear pore assembly: a molecular biophysics view.
abstract: The basic problem of nuclear pore assembly is the big perinuclear space that must be overcome for nuclear membrane fusion and pore creation. Our investigations of ternary complexes: DNA-PC liposomes-Mg²⁺, and modern conceptions of nuclear pore structure allowed us to introduce a new mechanism of nuclear pore assembly. DNA-induced fusion of liposomes (membrane vesicles) with a single-lipid bilayer or two closely located nuclear membranes is considered. After such fusion on the lipid bilayer surface, traces of a complex of ssDNA with lipids were revealed. At fusion of two identical small liposomes (membrane vesicles) < 100 nm in diameter, a "big" liposome (vesicle) with ssDNA on the vesicle equator is formed. ssDNA occurrence on liposome surface gives a biphasic character to the fusion kinetics. The "big" membrane vesicle surrounded by ssDNA is the base of nuclear pore assembly. Its contact with the nuclear envelope leads to fast fusion of half of the vesicles with one nuclear membrane; then ensues a fusion delay when ssDNA reaches the membrane. The next step is to turn inside out the second vesicle half and its fusion to other nuclear membrane. A hole is formed between the two membranes, and nucleoporins begin pore complex assembly around the ssDNA. The surface tension of vesicles and nuclear membranes along with the kinetic energy of a liquid inside a vesicle play the main roles in this process. Special cases of nuclear pore formation are considered: pore formation on both nuclear envelope sides, the difference of pores formed in various cell-cycle phases and linear nuclear pore clusters.
authors.affiliation: Department of Mechanisms Reception, Institute of Cell Biophysics, Russian Academy of Sciences, 142290 Pushchino, Moscow Region, Russia. vvkuvichkin@gmail.com
authors.forename: Vasily V
authors.initials: VV
authors.lastname: Kuvichkin
mesh_terms: D000818:Animals; D001703:Biophysics / Q000295:instrumentation / Q000379:methods*; D002462:Cell Membrane / Q000737:chemistry / Q000378:metabolism; D004247:DNA / Q000737:chemistry / Q000378:metabolism; D004277:DNA, Single-Stranded / Q000737:chemistry / Q000378:metabolism*; D005260:Female; D057446:Hydrodynamics; D008051:Lipid Bilayers / Q000737:chemistry / Q000378:metabolism*; D008081:Liposomes / Q000737:chemistry / Q000378:metabolism* / Q000648:ultrastructure; D008274:Magnesium / Q000378:metabolism; D008561:Membrane Fusion; D008854:Microscopy, Electron; D046529:Microscopy, Electron, Transmission; D008958:Models, Molecular; D022022:Nuclear Pore / Q000737:chemistry / Q000378:metabolism / Q000648:ultrastructure; D028861:Nuclear Pore Complex Proteins / Q000737:chemistry / Q000378:metabolism*; D009865:Oocytes / Q000737:chemistry / Q000378:metabolism; D010713:Phosphatidylcholines / Q000737:chemistry / Q000378:metabolism; D013050:Spectrometry, Fluorescence; D014982:Xenopus laevis
chemical_list: D004277:DNA, Single-Stranded; D008051:Lipid Bilayers; D008081:Liposomes; D028861:Nuclear Pore Complex Proteins; D010713:Phosphatidylcholines; D004247:DNA; C427203:calf thymus DNA; D008274:Magnesium