title: MAP Kinase analyser: A tool for plant kinase and substrate analysis.
abstract: MAPK (Mitogen Activated Protein Kinase) is a Ser/Thr kinase, which plays a crucial role in plant growth and development, transferring the extra cellular stimuli into intracellular response etc. Manual identification of these MAPK in the plant genome is tedious and time taking process. There are number of online servers which predict the P-site (phosphorylation site), find the motifs and domain but there is no specific tool which can identify all them together. In order to identify the P-Site, phosphorylation site consensus sequences and domain of the MAPK in plant genome, we developed a tool, MAP Kinase analyzer. MAP kinase analyzer take protein sequence as input in the fasta format and the output of tool includes: 1) The prediction of the phosphorylation site viz., Serine (S), Threonine (T), and Tyrosine (Y), Contex, Position, Score and phosphorylating kinase as well as the graphical output; 2) Phosphorylation site consensus sequence pattern for different kinases and 3) Domain information about the MAPK's. The MAP kinase analyser tool and supplementary files can be downloaded from http://www.bioinfogbpuat/mapk_OWN_1/.
authors: Saranga Dhar
authors: SD
authors: Samantaray
authors: Parvendra
authors: P
authors: Singh
authors: Bonthla Venkata
authors: BV
authors: Suresh
authors: Sugandha
authors: S
authors: Sharma
authors: Gohar
authors: G
authors: Taj
authors: Anil
authors: A
authors: Kumar