title: A majority of the cancer/testis antigens are intrinsically disordered proteins.
abstract: The cancer/testis antigens (CTAs) are a group of heterogeneous proteins that are typically expressed in the testis but aberrantly expressed in several types of cancer. Although overexpression of CTAs is frequently associated with advanced disease and poorer prognosis, the significance of this correlation is unclear since the functions of the CTAs in the disease process remain poorly understood. Here, employing a bioinformatics approach, we show that a majority of CTAs are intrinsically disordered proteins (IDPs). IDPs are proteins that, under physiological conditions in vitro, lack rigid 3D structures either along their entire length or in localized regions. Despite the lack of structure, most IDPs can transition from disorder to order upon binding to biological targets and often promote highly promiscuous interactions. IDPs play important roles in transcriptional regulation and signaling via regulatory protein networks and are often associated with dosage sensitivity. Consistent with these observations, we find that several CTAs can bind DNA, and their forced expression appears to increase cell growth implying a potential dosage-sensitive function. Furthermore, the CTAs appear to occupy "hub" positions in protein regulatory networks that typically adopt a "scale-free" power law distribution. Taken together, our data provide a novel perspective on the CTAs implicating them in processing and transducing information in altered physiological states in a dosage-sensitive manner. Identifying the CTAs that occupy hub positions in protein regulatory networks would allow a better understanding of their functions as well as the development of novel therapeutics to treat cancer.
authors: Department of Urology, James Buchanan Brady Urological Institute, Baltimore, MD 21287, USA.
authors: Krithika
authors: K
authors: Rajagopalan
authors: Steven M
authors: SM
authors: Mooney
authors: Nehal
authors: N
authors: Parekh
authors: Robert H
authors: RH
authors: Getzenberg
authors: Prakash
authors: P
authors: Kulkarni
mesh_terms: D000107:Acetylation; D000951:Antigens, Neoplasm / Q000235:genetics / Q000378:metabolism*; D006801:Humans; D008297:Male; D010766:Phosphorylation; D012333:RNA, Messenger / Q000235:genetics; D025842:SUMO-1 Protein / Q000378:metabolism; D013737:Testis / Q000276:immunology*
chemical_list: D000951:Antigens, Neoplasm; D012333:RNA, Messenger; D025842:SUMO-1 Protein