title: Nucleotide diversity of the colorless green alga Polytomella parva (Chlorophyceae, Chlorophyta): high for the mitochondrial telomeres, surprisingly low everywhere else.
abstract: Silent-site nucleotide diversity data (π(silent)) can provide insights into the forces driving genome evolution. Here we present π(silent) statistics for the mitochondrial and nuclear DNAs of Polytomella parva, a nonphotosynthetic green alga with a highly reduced, linear fragmented mitochondrial genome. We show that this species harbors very little genetic diversity, with the exception of the mitochondrial telomeres, which have an excess of polymorphic sites. These data are compared with previously published π(silent) values from the mitochondrial and nuclear genomes of the model species Chlamydomonas reinhardtii and Volvox carteri, which are close relatives of P. parva, and are used to understand the modes and tempos of genome evolution within green algae.
authors.affiliation: Department of Biology, Dalhousie University, Halifax, Nova Scotia, Canada B3H 4R2.
authors.forename: David Roy
authors.initials: DR
authors.lastname: Smith
authors.forename: Robert W
authors.initials: RW
authors.lastname: Lee
mesh_terms: D000460:Chlorophyta / Q000235:genetics*; D019143:Evolution, Molecular; D014644:Genetic Variation; D054629:Genome, Mitochondrial; D008928:Mitochondria / Q000235:genetics*; D008969:Molecular Sequence Data; D016615:Telomere / Q000235:genetics*