title: Membrane inlet for mass spectrometric measurement of catalysis by enzymatic decarboxylases.
abstract: Membrane inlet mass spectrometry (MIMS) uses diffusion across a permeable membrane to detect in solution uncharged molecules of small molecular weight. We point out here the application of MIMS to determine catalytic properties of decarboxylases using as an example catalysis by oxalate decarboxylase (OxDC) from Bacillus subtilis. The decarboxylase activity generates carbon dioxide and formate from the nonoxidative reaction but is accompanied by a concomitant oxidase activity that consumes oxalate and oxygen and generates CO(2) and hydrogen peroxide. The application of MIMS in measuring catalysis by OxDC involves the real-time and continuous detection of oxygen and product CO(2) from the ion currents of their respective mass peaks. Steady-state catalytic constants for the decarboxylase activity obtained by measuring product CO(2) using MIMS are comparable to those acquired by the traditional endpoint assay based on the coupled reaction with formate dehydrogenase, and measuring consumption of O(2) using MIMS also estimates the oxidase activity. The use of isotope-labeled substrate ((13)C(2)-enriched oxalate) in MIMS provides a method to characterize the catalytic reaction in cell suspensions by detecting the mass peak for product (13)CO(2) (m/z 45), avoiding inaccuracies due to endogenous (12)CO(2).
authors.affiliation: Department of Chemistry, University of Florida, Gainesville, FL 32610, USA.
authors.forename: Mario E G
authors.initials: ME
authors.lastname: Moral
authors.forename: Chingkuang
authors.initials: C
authors.lastname: Tu
authors.forename: Nigel G J
authors.initials: NG
authors.lastname: Richards
authors.forename: David N
authors.initials: DN
authors.lastname: Silverman
mesh_terms: D001412:Bacillus subtilis / Q000201:enzymology / Q000378:metabolism; D055162:Biocatalysis; D002245:Carbon Dioxide / Q000032:analysis / Q000378:metabolism; D002247:Carbon Isotopes; D002262:Carboxy-Lyases / Q000737:chemistry*; D007700:Kinetics; D013058:Mass Spectrometry / Q000295:instrumentation* / Q000379:methods*; D008567:Membranes, Artificial; D010100:Oxygen / Q000378:metabolism; D010539:Permeability
chemical_list: D002247:Carbon Isotopes; D008567:Membranes, Artificial; D002245:Carbon Dioxide; D002262:Carboxy-Lyases; C021915:oxalate decarboxylase; D010100:Oxygen