title: Potential role of atomic force microscopy in systems biology.
abstract: Systems biology is a quantitative approach for understanding a biological system at its global level through systematic perturbation and integrated analysis of all its components. Simultaneous acquisition of information data sets pertaining to the system components (e.g., genome, proteome) is essential to implement this approach. There are limitations to such an approach in measuring gene expression levels and accounting for all proteins in the system. The success of genomic studies is critically dependent on polymerase chain reaction (PCR) for its amplification, but PCR is very uneven in amplifying the samples, ineffective in scarce samples and unreliable in low copy number transcripts. On the other hand, lack of amplifying techniques for proteins critically limits their identification to only a small fraction of high concentration proteins. Atomic force microscopy (AFM), AFM cantilever sensors, and AFM force spectroscopy in particular, could address these issues directly. In this article, we reviewed and assessed their potential role in systems biology.
authors.affiliation: Department of Bioengineering, University of California San Diego, La Jolla, CA, USA. srinivasan@ucsd.edu
authors.forename: Srinivasan
authors.initials: S
authors.lastname: Ramachandran
authors.forename: Fernando
authors.initials: F
authors.lastname: Teran Arce
authors.forename: Ratnesh
authors.initials: R
authors.lastname: Lal
mesh_terms: D001798:Blood Proteins / Q000378:metabolism; D016678:Genome; D015894:Genome, Human; D006801:Humans; D018625:Microscopy, Atomic Force; D020543:Proteome / Q000378:metabolism; D049490:Systems Biology
chemical_list: D001798:Blood Proteins; D020543:Proteome