title: [Application of denaturing high performance liquid chromatography for detection of alpha-hemoglobin-stabilizing protein gene].
abstract: An assay method for alpha-hemoglobin-stabilizing protein (AHSP) gene was established based on denaturing high performance liquid chromatography (DHPLC). The AHSP gene sequences are divided into six fragments. Because of one or two common single nucleotide polymorphism (SNPs) in the first, second, fourth and sixth fragments, all samples should be analyzed individually when the fragments were detected. The third and fifth fragments were detected by DHPLC technique combined with DNA pooling for no common SNP in the fragments. The six common SNPs in AHSP gene can be genotyped accurately by the established method. After analyzing AHSP gene of 40 samples by DHPLC detection and gene sequencing, it was found that the results of the two methods were completely consistent. After AHSP gene of 365 samples being analyzed by DHPLC, two rare SNPs (11,810 G > A and 12,802 C > T)were found. Two missense mutations (AHSP D29V and AHSP V56G) were also found. AHSP D29V mutation is a novel mutation. AHSP V56G is a rare mutation. It demonstrated that this method is suitable for the detection of alpha-hemoglobin-stabilizing protein gene.
authors.affiliation: Department of Microbiology and Immunology, Medical College, Jinan University, Guangzhou 510632, China. twangz@jnu.edu.cn
authors.forename: Zhipeng
authors.initials: Z
authors.lastname: Wang
mesh_terms: D001483:Base Sequence; D001798:Blood Proteins / Q000235:genetics*; D002851:Chromatography, High Pressure Liquid / Q000379:methods*; D004252:DNA Mutational Analysis; D005786:Gene Expression Regulation; D014644:Genetic Variation; D005838:Genotype; D006801:Humans; D018832:Molecular Chaperones / Q000235:genetics*; D008969:Molecular Sequence Data; D020125:Mutation, Missense / Q000235:genetics; D020641:Polymorphism, Single Nucleotide / Q000235:genetics*; D017086:beta-Thalassemia / Q000235:genetics*
chemical_list: C468768:AHSP protein, human; D001798:Blood Proteins; D018832:Molecular Chaperones