title: A complete genome assembly of Glaciecola mesophila sp. nov. sequenced by using BIGIS-4 sequencer system.
abstract: Using a pyrosequencing-based custom-made sequencer BIGIS-4, we sequenced a Gram-negative bacterium Glaciecola mesophila sp. nov. (Gmn) isolated from marine invertebrate specimens. We generated 152043 sequencing reads with a mean high-quality length of 406 bp, and assembled them using the BIGIS-4 post-processing module. No systematic low-quality data was detected beyond expected homopolymer-derived errors. The assembled Gmn genome is 5144318 bp in length and harbors 4303 annotated genes. A large number of metabolic genes correspond to various nutrients from surface marine invertebrates. Its abundant cold-tolerant and cellular signaling and related genes reveal a fundamental adaptation to low-temperature marine environment.
authors.affiliation: Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100029, China.
authors.forename: Lina
authors.initials: L
authors.lastname: Yuan
authors.forename: Lufeng
authors.initials: L
authors.lastname: Ren
authors.forename: Yuntao
authors.initials: Y
authors.lastname: Li
authors.forename: Weijing
authors.initials: W
authors.lastname: Han
authors.forename: Yong
authors.initials: Y
authors.lastname: Yu
authors.forename: Yanan
authors.initials: Y
authors.lastname: Chu
authors.forename: Guiming
authors.initials: G
authors.lastname: Liu
authors.forename: Dan
authors.initials: D
authors.lastname: Yu
authors.forename: Mingjing
authors.initials: M
authors.lastname: Teng
authors.forename: Liang
authors.initials: L
authors.lastname: Wang
authors.forename: Xumin
authors.initials: X
authors.lastname: Wang
authors.forename: Xiaoguang
authors.initials: X
authors.lastname: Zhou
authors.forename: Yude
authors.initials: Y
authors.lastname: Yu
authors.forename: Jun
authors.initials: J
authors.lastname: Yu
mesh_terms: D004269:DNA, Bacterial / Q000235:genetics; D016680:Genome, Bacterial; D006090:Gram-Negative Bacteria / Q000235:genetics*
chemical_list: D004269:DNA, Bacterial