title: Poseidonocella pacifica gen. nov., sp. nov. and Poseidonocella sedimentorum sp. nov., novel alphaproteobacteria from the shallow sandy sediments of the Sea of Japan.
abstract: The taxonomic study of two Gram-negative, aerobic, non-pigmented bacteria KMM 9010(T) and KMM 9023(T) isolated from a sandy sediment sample collected from the Sea of Japan seashore was performed. On the basis of the nearly complete 16S rRNA gene sequences, strains KMM 9010(T) and KMM 9023(T) clustered with the Roseobacter lineage (class Alphaproteobacteria) forming a distinct phylogenetic line adjacent to the genus Donghicola. Novel strains shared the highest sequence similarity of 96.4% to each other and lower than 96.1% similarities to other validly named genera of the class Alphaproteobacteria. In both strains, ubiquinone Q-10 was found to be the major respiratory quinone; phosphatidylcholine, phosphatidylglycerol, diphosphatidylglycerol, phosphatidic acid, and an unknown aminolipid were the major polar lipids and C(18:1)ω7c and 11-methyl C(18:1)ω7c were predominant fatty acids. The DNA G+C content was 60.5 mol% (KMM 9010(T)) and 65.4 mol% (KMM 9023(T)). Based on phenotypic properties and phylogenetic evidence, strains KMM 9010(T) and KMM 9023(T) should be classified as two novel species in a new genus, Poseidonocella gen. nov., with Poseidonocella pacifica sp. nov., the type species with the type strain KMM 9010(T) (= NRIC 0794(T) = JCM 17310(T)), and Poseidonocella sedimentorum sp. nov. as the second species with the type strain KMM 9023(T) (= NRIC 0796(T) = JCM 17311(T)).
authors.affiliation: Pacific Institute of Bioorganic Chemistry, Far-Eastern Branch, Russian Academy of Sciences, Prospect 100 Let Vladivostoku, 159, 690022 Vladivostok, Russia. lro@piboc.dvo.ru
authors.forename: Lyudmila A
authors.initials: LA
authors.lastname: Romanenko
authors.forename: Naoto
authors.initials: N
authors.lastname: Tanaka
authors.forename: Vasily I
authors.initials: VI
authors.lastname: Svetashev
authors.forename: Nataliya I
authors.initials: NI
authors.lastname: Kalinovskaya
mesh_terms: D020561:Alphaproteobacteria / Q000737:chemistry / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification; D001482:Base Composition; D004275:DNA, Ribosomal / Q000235:genetics; D005227:Fatty Acids / Q000032:analysis; D019015:Geologic Sediments / Q000382:microbiology*; D007564:Japan; D008055:Lipids / Q000032:analysis; D008969:Molecular Sequence Data; D009792:Oceans and Seas; D010802:Phylogeny; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D012689:Sequence Homology, Nucleic Acid; D013045:Species Specificity
chemical_list: D004275:DNA, Ribosomal; D005227:Fatty Acids; D008055:Lipids; D012336:RNA, Ribosomal, 16S