title: ExpressionPlot: a web-based framework for analysis of RNA-Seq and microarray gene expression data.
abstract: RNA-Seq and microarray platforms have emerged as important tools for detecting changes in gene expression and RNA processing in biological samples. We present ExpressionPlot, a software package consisting of a default back end, which prepares raw sequencing or Affymetrix microarray data, and a web-based front end, which offers a biologically centered interface to browse, visualize, and compare different data sets. Download and installation instructions, a user's manual, discussion group, and a prototype are available at http://expressionplot.com/.
authors.affiliation: Department of Molecular and Cell Biology, Harvard University, 7 Divinity Ave, Cambridge, MA 02138, USA. brad.aaron.friedman@gmail.com
authors.forename: Brad A
authors.initials: BA
authors.lastname: Friedman
authors.forename: Tom
authors.initials: T
authors.lastname: Maniatis
mesh_terms: D000818:Animals; D019295:Computational Biology; D030541:Databases, Genetic; D020869:Gene Expression Profiling / Q000379:methods*; D006801:Humans; D020407:Internet; D020411:Oligonucleotide Array Sequence Analysis; D017423:Sequence Analysis, RNA / Q000379:methods*; D012984:Software; D014584:User-Computer Interface