title: Performance characteristics and comparison of Abbott and artus real-time systems for hepatitis B virus DNA quantification.
abstract: Virological monitoring of hepatitis B virus (HBV) DNA is critical to the management of HBV infection. With several HBV DNA quantification assays available, it is important to use the most efficient testing system for virological monitoring. In this study, we evaluated the performance characteristics and comparability of three HBV DNA quantification systems: Abbott HBV real-time PCR (Abbott PCR), artus HBV real-time PCR with QIAamp DNA blood kit purification (artus-DB), and artus HBV real-time PCR with the QIAamp DSP virus kit purification (artus-DSP). The lower limits of detection of these systems were established against the WHO international standards for HBV DNA and were found to be 1.43, 82, and 9 IU/ml, respectively. The intra-assay and interassay coefficients of variation of plasma samples (1 to 6 log(10) IU/ml) ranged between 0.05 to 8.34% and 0.16 to 3.48% for the Abbott PCR, 1.53 to 26.85% and 0.50 to 12.89% for artus-DB, and 0.29 to 7.42% and 0.94 to 3.01% for artus-DSP, respectively. Ninety HBV clinical samples were used for comparison of assays, and paired quantitative results showed strong correlation by linear regression analysis (artus-DB with Abbott PCR, r = 0.95; Abbott PCR with artus-DSP, r = 0.97; and artus-DSP with artus-DB, r = 0.94). Bland-Altman analysis showed a good level of agreement for Abbott PCR and artus-DSP, with a mean difference of 0.10 log(10) IU/ml and limits of agreement of -0.91 to 1.11 log(10) IU/ml. No genotype-specific bias was seen in all three systems for HBV genotypes A, C, and D, which are predominant in this region. This finding illustrates that the Abbott real-time HBV and artus-DSP systems show more comparable performance than the artus-DB system, meeting the current guidelines for assays to be used in the management of hepatitis B.
authors.affiliation: Department of Clinical Virology, Christian Medical College, Vellore 632004, India.
authors.forename: Ashrafali M
authors.initials: AM
authors.lastname: Ismail
authors.forename: Jayashree
authors.initials: J
authors.lastname: Sivakumar
authors.forename: Raghavendran
authors.initials: R
authors.lastname: Anantharam
authors.forename: Sujitha
authors.initials: S
authors.lastname: Dayalan
authors.forename: Prasanna
authors.initials: P
authors.lastname: Samuel
authors.forename: Gnanadurai J
authors.initials: GJ
authors.lastname: Fletcher
authors.forename: Manu
authors.initials: M
authors.lastname: Gnanamony
authors.forename: Priya
authors.initials: P
authors.lastname: Abraham
mesh_terms: D004279:DNA, Viral / Q000097:blood*; D006515:Hepatitis B virus / Q000235:genetics / Q000302:isolation & purification*; D006801:Humans; D060888:Real-Time Polymerase Chain Reaction / Q000379:methods*; D015203:Reproducibility of Results; D012680:Sensitivity and Specificity; D019562:Viral Load / Q000379:methods*
chemical_list: D004279:DNA, Viral