title: The proteomic signature of Aspergillus fumigatus during early development.
abstract: Aspergillus fumigatus is a saprophytic fungus that causes a range of diseases in humans including invasive aspergillosis. All forms of disease begin with the inhalation of conidia, which germinate and develop. Four stages of early development were evaluated using the gel free system of isobaric tagging for relative and absolute quantitation to determine the full proteomic profile of the pathogen. A total of 461 proteins were identified at 0, 4, 8, and 16 h and fold changes for each were established. Ten proteins including the hydrophobin rodlet protein RodA and a protein involved in melanin synthesis Abr2 were found to decrease relative to conidia. To generate a more comprehensive view of early development, a whole genome microarray analysis was performed comparing conidia to 8 and 16 h of growth. A total of 1871 genes were found to change significantly at 8 h with 1001 genes up-regulated and 870 down-regulated. At 16 h, 1235 genes changed significantly with 855 up-regulated and 380 down-regulated. When a comparison between the proteomics and microarray data was performed at 8 h, a total of 22 proteins with significant changes also had corresponding genes that changed significantly. When the same comparison was performed at 16 h, 12 protein and gene combinations were found. This study, the most comprehensive to date, provides insights into early pathways activated during growth and development of A. fumigatus. It reveals a pathogen that is gearing up for rapid growth by building translation machinery, generating ATP, and is very much committed to aerobic metabolism.
authors.affiliation: Public Health Research Institute, New Jersey Medical School - University of Medicine and Dentistry of New Jersey, Newark, NJ 07103, USA.
authors.forename: Steven E
authors.initials: SE
authors.lastname: Cagas
authors.forename: Mohit Raja
authors.initials: MR
authors.lastname: Jain
authors.forename: Hong
authors.initials: H
authors.lastname: Li
authors.forename: David S
authors.initials: DS
authors.lastname: Perlin
mesh_terms: D001228:Aspergillosis / Q000382:microbiology; D001232:Aspergillus fumigatus / Q000235:genetics / Q000254:growth & development* / Q000378:metabolism; D015415:Biomarkers / Q000378:metabolism; D015195:Drug Design; D005656:Fungal Proteins / Q000235:genetics / Q000378:metabolism*; D020869:Gene Expression Profiling; D015966:Gene Expression Regulation, Fungal; D016681:Genome, Fungal; D025282:Mycelium; D020411:Oligonucleotide Array Sequence Analysis; D020543:Proteome / Q000235:genetics / Q000378:metabolism*
chemical_list: D015415:Biomarkers; D005656:Fungal Proteins; D020543:Proteome