title: Motor-driven dynamics of cytoskeletal filaments in motility assays.
abstract: We model analytically the dynamics of a cytoskeletal filament in a motility assay. The filament is described as rigid rod free to slide in two dimensions. The motor proteins consist of polymeric tails tethered to the plane and modeled as linear springs and motor heads that bind to the filament. As in related models of rigid and soft two-state motors, the binding and unbinding dynamics of the motor heads and the dependence of the transition rates on the load exerted by the motor tails play a crucial role in controlling the filament's dynamics. Our work shows that the filament effectively behaves as a self-propelled rod at long times, but with non-Markovian noise sources arising from the coupling to the motor binding and unbinding dynamics. The effective propulsion force of the filament and the active renormalization of the various friction and diffusion constants are calculated in terms of microscopic motor and filament parameters. These quantities could be probed by optical force microscopy.
authors.affiliation: Physics Department, Syracuse University, Syracuse, New York 13244, USA.
authors.forename: Shiladitya
authors.initials: S
authors.lastname: Banerjee
authors.forename: M Cristina
authors.initials: MC
authors.lastname: Marchetti
authors.forename: Kristian
authors.initials: K
authors.lastname: Müller-Nedebock
mesh_terms: D000465:Algorithms; D001703:Biophysics / Q000379:methods; D003599:Cytoskeleton / Q000502:physiology*; D004058:Diffusion; D017276:Friction; D006801:Humans; D018625:Microscopy, Atomic Force / Q000379:methods; D015233:Models, Statistical; D009068:Movement; D016011:Normal Distribution; D011108:Polymers / Q000737:chemistry; D011506:Proteins / Q000737:chemistry*; D013269:Stochastic Processes; D013997:Time Factors
chemical_list: D011108:Polymers; D011506:Proteins