title: A one-step miniprep for the isolation of plasmid DNA and lambda phage particles.
abstract: Plasmid DNA minipreps are fundamental techniques in molecular biology. Current plasmid DNA minipreps use alkali and the anionic detergent SDS in a three-solution format. In addition, alkali minipreps usually require additional column-based purification steps and cannot isolate other extra-chromosomal elements, such as bacteriophages. Non-ionic detergents (NIDs) have been used occasionally as components of multiple-solution plasmid DNA minipreps, but a one-step approach has not been developed. Here, we have established a one-tube, one-solution NID plasmid DNA miniprep, and we show that this approach also isolates bacteriophage lambda particles. NID minipreps are more time-efficient than alkali minipreps, and NID plasmid DNA performs better than alkali DNA in many downstream applications. In fact, NID crude lysate DNA is sufficiently pure to be used in digestion and sequencing reactions. Microscopic analysis showed that the NID procedure fragments E. coli cells into small protoplast-like components, which may, at least in part, explain the effectiveness of this approach. This work demonstrates that one-step NID minipreps are a robust method to generate high quality plasmid DNA, and NID approaches can also isolate bacteriophage lambda particles, outperforming current standard alkali-based minipreps.
authors.affiliation: Division of Neonatology, Department of Pediatrics, The University of Utah School of Medicine, Salt Lake City, Utah, United States of America.
authors.forename: George
authors.initials: G
authors.lastname: Lezin
authors.forename: Yasuhiro
authors.initials: Y
authors.lastname: Kosaka
authors.forename: H Joseph
authors.initials: HJ
authors.lastname: Yost
authors.forename: Michael R
authors.initials: MR
authors.lastname: Kuehn
authors.forename: Luca
authors.initials: L
authors.lastname: Brunelli
mesh_terms: D010582:Bacteriophage lambda / Q000235:genetics / Q000302:isolation & purification*; D004247:DNA / Q000032:analysis / Q000235:genetics / Q000302:isolation & purification*; D004269:DNA, Bacterial / Q000235:genetics / Q000302:isolation & purification; D004279:DNA, Viral / Q000235:genetics / Q000302:isolation & purification; D004926:Escherichia coli / Q000235:genetics; D008967:Molecular Biology / Q000379:methods; D008969:Molecular Sequence Data; D010957:Plasmids / Q000235:genetics / Q000302:isolation & purification*; D015203:Reproducibility of Results; D017422:Sequence Analysis, DNA; D014771:Virion / Q000235:genetics / Q000302:isolation & purification*
chemical_list: D004269:DNA, Bacterial; D004279:DNA, Viral; D004247:DNA