title: Natronoflexus pectinivorans gen. nov. sp. nov., an obligately anaerobic and alkaliphilic fermentative member of Bacteroidetes from soda lakes.
abstract: Anaerobic enrichment with pectin at pH 10 and moderate salinity inoculated with sediments from soda lakes of the Kulunda Steppe (Altai, Russia) resulted in the isolation of a novel member of the Bacteroidetes, strain AP1(T). The cells are long, flexible, Gram-negative rods forming pink carotenoids. The isolate is an obligate anaerobe, fermenting various carbohydrates to acetate and succinate. It can hydrolyze and utilize pectin, xylan, starch, laminarin and pullulan as growth substrates. Growth is possible in a pH range from 8 to 10.5, with an optimum at pH 9.5, and at a salinity range from 0.1 to 2 M Na(+). Phylogenetic analysis based on 16S rRNA sequences placed the isolate into the phylum Bacteroidetes as a separate lineage within the family Marinilabilaceae. On the basis of distinct phenotype and phylogeny, the soda lake isolate AP1(T) is proposed to be assigned in a new genus and species Natronoflexus pectinivorans (=DSM24179(T) = UNIQEM U807(T)).
authors.affiliation: Winogradsky Institute of Microbiology, Russian Academy of Sciences, Moscow, Russia. soroc@inmi.ru
authors.forename: D Y
authors.initials: DY
authors.lastname: Sorokin
authors.forename: A N
authors.initials: AN
authors.lastname: Panteleeva
authors.forename: T P
authors.initials: TP
authors.lastname: Tourova
authors.forename: E N
authors.initials: EN
authors.lastname: Kaparullina
authors.forename: G
authors.initials: G
authors.lastname: Muyzer
mesh_terms: D000693:Anaerobiosis; D041963:Bacteroidetes / Q000235:genetics / Q000302:isolation & purification* / Q000378:metabolism; D005285:Fermentation; D006868:Hydrolysis; D008854:Microscopy, Electron; D010368:Pectins / Q000378:metabolism; D010802:Phylogeny; D012336:RNA, Ribosomal, 16S / Q000235:genetics
chemical_list: D012336:RNA, Ribosomal, 16S; D010368:Pectins