title: Fasciculography: robust prior-free real-time normalized volumetric neural tract parcellation.
abstract: Fiber tracking in diffusion tensor magnetic resonance images (DTIs) reveals 3-D structural connectivity of the brain conveniently and thus is a viable tool for investigating neural differences. Unfortunately, local noise, image artifacts and numerical tracking errors during integration-based techniques are cumulative. Prematurely terminated fibers and under-sampled fiber bundles result in incomplete reconstruction of white matter fiber tracts and hence incorrect anatomical measurements. Quantitative cross-subject tract analysis, which is critical for abnormality detection, is complicated by inefficient and inaccurate tract reconstruction and normalization from fiber bundles. Because of the above problems, we propose a parcellation method that aims for lower sensitivity to initialization and local orientation error by directly segmenting full white matter tracts (Fasciculography), rather than reconstructing individual curves, from diffusion tensor fields. A fast, robust volumetric, and intrinsically normalized solution is achieved by noise-filtering using a generic parametrized tract model to prevent premature tract termination. At the same time, orientation information reduces the search space, significantly speeding up the tract parcellation process with less human intervention. Detailed comparisons against streamline tracking, shortest-path tracking, and nonrigid registration using synthetic and real DTIs confirmed the superior properties of Fasciculography. Since a normalized tract can be delineated interactively in a just few seconds using the proposed method, accurate high volume tract comparisons become feasible.
authors.affiliation: Department of Biomedical Engineering,Yale University, New Haven, CT 06519, USA.
authors.forename: Hon Pong
authors.initials: HP
authors.lastname: Ho
authors.forename: Fei
authors.initials: F
authors.lastname: Wang
authors.forename: Xenophon
authors.initials: X
authors.lastname: Papademetris
authors.forename: Hilary P
authors.initials: HP
authors.lastname: Blumberg
authors.forename: Lawrence H
authors.initials: LH
authors.lastname: Staib
mesh_terms: D000465:Algorithms; D001921:Brain / Q000166:cytology*; D003199:Computer Systems; D056324:Diffusion Tensor Imaging / Q000379:methods*; D006801:Humans; D007089:Image Enhancement / Q000379:methods; D007090:Image Interpretation, Computer-Assisted / Q000379:methods*; D021621:Imaging, Three-Dimensional / Q000379:methods*; D009413:Nerve Fibers, Myelinated / Q000648:ultrastructure*; D010363:Pattern Recognition, Automated / Q000379:methods*; D015203:Reproducibility of Results; D012680:Sensitivity and Specificity